RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 MAGEC2Q9UBF1 373 aaPredicted RBP21.96■■□□□ 1.11
HMGA2-211ENST00000545998 NXF1Q9UBU9 619 aaKnown RBP21.96■■□□□ 1.11
HMGA2-211ENST00000545998 POLIQ9UNA4 740 aa21.96■■□□□ 1.11
HMGA2-211ENST00000545998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.95■■□□□ 1.11
HMGA2-211ENST00000545998 OR6C75A6NL08 312 aa21.95■■□□□ 1.11
HMGA2-211ENST00000545998 GABRDO14764 452 aa21.95■■□□□ 1.11
HMGA2-211ENST00000545998 N4BP1O75113 896 aaKnown RBP21.95■■□□□ 1.11
HMGA2-211ENST00000545998 GLUD1P00367 558 aa21.95■■□□□ 1.11
HMGA2-211ENST00000545998 AFPP02771 609 aaKnown RBP21.95■■□□□ 1.11
HMGA2-211ENST00000545998 LTBRP36941 435 aa21.95■■□□□ 1.11
HMGA2-211ENST00000545998 MTIF2P46199 727 aaKnown RBP21.95■■□□□ 1.11
HMGA2-211ENST00000545998 MYL7Q01449 175 aa21.95■■□□□ 1.11
HMGA2-211ENST00000545998 NCAPHQ15003 741 aa21.95■■□□□ 1.11
HMGA2-211ENST00000545998 KBTBD7Q8WVZ9 684 aa21.95■■□□□ 1.11
HMGA2-211ENST00000545998 IMPG2Q9BZV3 1241 aa21.95■■□□□ 1.11
HMGA2-211ENST00000545998 APOBEC3GQ9HC16 384 aaKnown RBP21.95■■□□□ 1.11
HMGA2-211ENST00000545998 FANCLQ9NW38 375 aa21.95■■□□□ 1.11
HMGA2-211ENST00000545998 KCNJ18B7U540 433 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 P4HA2O15460 535 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 TBX10O75333 385 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 TACC1O75410 805 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 NOP14P78316 857 aaKnown RBP21.95■■□□□ 1.1
HMGA2-211ENST00000545998 ROR1Q01973 937 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 DLX2Q07687 328 aaPredicted RBP21.95■■□□□ 1.1
HMGA2-211ENST00000545998 KCNJ12Q14500 433 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 TCP11X2Q5H9J9 407 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 THEM5Q8N1Q8 247 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 AOPEPQ8N6M6 819 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 OR10T2Q8NGX3 314 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 UBE2ZQ9H832 354 aaPredicted RBP21.95■■□□□ 1.1
HMGA2-211ENST00000545998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.95■■□□□ 1.1
HMGA2-211ENST00000545998 CLEC1BQ9P126 229 aa21.95■■□□□ 1.1
HMGA2-211ENST00000545998 WDR27A2RRH5 827 aa21.94■■□□□ 1.1
HMGA2-211ENST00000545998 CLSTN1O94985 981 aa21.94■■□□□ 1.1
HMGA2-211ENST00000545998 FAM163BP0C2L3 166 aa21.94■■□□□ 1.1
HMGA2-211ENST00000545998 WARSP23381 471 aaKnown RBP21.94■■□□□ 1.1
HMGA2-211ENST00000545998 EEF1GP26641 437 aaKnown RBP21.94■■□□□ 1.1
HMGA2-211ENST00000545998 LHX1P48742 406 aa21.94■■□□□ 1.1
HMGA2-211ENST00000545998 OSTM1Q86WC4 334 aa21.94■■□□□ 1.1
HMGA2-211ENST00000545998 CASP10Q92851 521 aa21.94■■□□□ 1.1
HMGA2-211ENST00000545998 HLA-CQ95604 372 aa21.94■■□□□ 1.1
HMGA2-211ENST00000545998 TMEM209Q96SK2 561 aa21.94■■□□□ 1.1
HMGA2-211ENST00000545998 SMYD3Q9H7B4 428 aa21.94■■□□□ 1.1
HMGA2-211ENST00000545998 BARX2Q9UMQ3 279 aaPredicted RBP21.94■■□□□ 1.1
HMGA2-211ENST00000545998 VCANP13611 3396 aa21.94■■□□□ 1.1
HMGA2-211ENST00000545998 ABLIM3O94929 683 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 SRGAP2BP0DMP2 458 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 P4HA1P13674 534 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 ASPAP45381 313 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 ZNF165P49910 485 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 MAN2A1Q16706 1144 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 EP400NLQ6ZTU2 488 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 DHX40Q8IX18 779 aaKnown RBP21.93■■□□□ 1.1
HMGA2-211ENST00000545998 CCDC150Q8NCX0 1101 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 ZNF461Q8TAF7 563 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 MRPL45Q9BRJ2 306 aaKnown RBP21.93■■□□□ 1.1
HMGA2-211ENST00000545998 TUBGCP2Q9BSJ2 902 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 HSD3B7Q9H2F3 369 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 PRDM6Q9NQX0 595 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 DDX43Q9NXZ2 648 aaKnown RBP21.93■■□□□ 1.1
HMGA2-211ENST00000545998 COG5Q9UP83 839 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 A0A0C4DFX4 3053 aa21.93■■□□□ 1.1
HMGA2-211ENST00000545998 OR4Q2P0C623 313 aa21.92■■□□□ 1.1
HMGA2-211ENST00000545998 SPATA31D3P0C874 917 aa21.92■■□□□ 1.1
HMGA2-211ENST00000545998 ARPP19P56211 112 aa21.92■■□□□ 1.1
HMGA2-211ENST00000545998 SCARA5Q6ZMJ2 495 aa21.92■■□□□ 1.1
HMGA2-211ENST00000545998 SPATA31D4Q6ZUB0 917 aa21.92■■□□□ 1.1
HMGA2-211ENST00000545998 ACBD6Q9BR61 282 aa21.92■■□□□ 1.1
HMGA2-211ENST00000545998 NIF3L1Q9GZT8 377 aa21.92■■□□□ 1.1
HMGA2-211ENST00000545998 ZCWPW1Q9H0M4 648 aa21.92■■□□□ 1.1
HMGA2-211ENST00000545998 MAN1C1Q9NR34 630 aa21.92■■□□□ 1.1
HMGA2-211ENST00000545998 FBXW11Q9UKB1 542 aa21.92■■□□□ 1.1
HMGA2-211ENST00000545998 CPB1P15086 417 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 ZNF18P17022 549 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 CDH8P55286 799 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 CETN1Q12798 172 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 WDR44Q5JSH3 913 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 MIIPQ5JXC2 388 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 TPGS2Q68CL5 300 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 ANKRD54Q6NXT1 300 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 KREMEN2Q8NCW0 462 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 LMO3Q8TAP4 145 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 HDAC7Q8WUI4 952 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 FAXDC2Q96IV6 333 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 MSLNLQ96KJ4 702 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 BCO2Q9BYV7 579 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 SDCBP2Q9H190 292 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 PLEKHA4Q9H4M7 779 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 DZANK1Q9NVP4 752 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 HCRTO43612 131 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 PRKCSHP14314 528 aaPredicted RBP21.91■■□□□ 1.1
HMGA2-211ENST00000545998 LMO2P25791 158 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 GNL1P36915 607 aaPredicted RBP21.91■■□□□ 1.1
HMGA2-211ENST00000545998 RAP1GAPP47736 663 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 GPR17Q13304 367 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 IQCB1Q15051 598 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 RNF19BQ6ZMZ0 732 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 TATDN2Q93075 761 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 SNX25Q9H3E2 840 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 DPP7Q9UHL4 492 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms