RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 MRPS25P82663 173 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 PPM1LQ5SGD2 360 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 CCDC137Q6PK04 289 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 CYP4F11Q9HBI6 524 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 SCUBE2Q9NQ36 999 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 CNTNAP2Q9UHC6 1331 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 TMEM247A6NEH6 219 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 GNGT2O14610 69 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 SLC2A3P11169 496 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 RABGAP1LQ5R372 815 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 TAF2Q6P1X5 1199 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 UCMAQ8WVF2 138 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 TRAPPC12Q8WVT3 735 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 SLC5A5Q92911 643 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 CDK5RAP1Q96SZ6 601 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 MED4Q9NPJ6 270 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 TRPM5Q9NZQ8 1165 aa9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 TPX2Q9ULW0 747 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-202ENST00000545908 PRR23AA6NEV1 266 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 KPNA7A9QM74 516 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 SMIM10L2AP0DMW4 78 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 SMIM10L2BP0DMW5 78 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 GARTP22102 1010 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 CCDC144BQ3MJ40 725 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 RNF10Q8N5U6 811 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 MAML1Q92585 1016 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 FOPNLQ96NB1 174 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 CAMKK2Q96RR4 588 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 TLR8Q9NR97 1041 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 G3BP2Q9UN86 482 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 PCDHB2Q9Y5E7 798 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 A0A087WUV0 522 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 M0QYT0 321 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 EIF3BP55884 814 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 LAMB3Q13751 1172 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 GLE1Q53GS7 698 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 SYCP2LQ5T4T6 812 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 FAM171A1Q5VUB5 890 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 CD99L2Q8TCZ2 262 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 TAF1DQ9H5J8 278 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 UVRAGQ9P2Y5 699 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 SUN1O94901 812 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 BAG2O95816 211 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 CXCL8P10145 99 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 MCF2P10911 925 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 ZKSCAN8Q15776 578 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 A1CFQ9NQ94 594 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 DDX43Q9NXZ2 648 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 BFARQ9NZS9 450 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 PHRF1Q9P1Y6 1649 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 CCDC195A0A1B0GUA6 201 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 CASQ2O14958 399 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 RNASEH1O60930 286 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 MRPS6P82932 125 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 GRIN1Q05586 938 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 PDAP1Q13442 181 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 ART3Q13508 389 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 TRAPPC11Q7Z392 1133 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 RMDN2Q96LZ7 410 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 KRT38O76015 456 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 PGK1P00558 417 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 RALBP11234 206 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 VDRP11473 427 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 SLC9A1P19634 815 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 PCK1P35558 622 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 ELAVL2Q12926 359 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 CSGALNACT1Q8TDX6 532 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 RSRC1Q96IZ7 334 aaKnown RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 MAP3K13O43283 966 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 CYP24A1Q07973 514 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 POLD3Q15054 466 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 IZUMO3Q5VZ72 239 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 ARMC6Q6NXE6 501 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 CRLF3Q8IUI8 442 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 EPS15L1Q9UBC2 864 aa9.48□□□□□ -0.89
MTHFD1-202ENST00000545908 TLR2O60603 784 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 OCRLQ01968 901 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 E2F5Q15329 346 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 SMTNL2Q2TAL5 461 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 ZBED8Q8IZ13 594 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 PPM1NQ8N819 430 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 C1orf131Q8NDD1 294 aaKnown RBP9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 FEZF2Q8TBJ5 459 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 ATXN7L3BQ96GX2 97 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 PLAAQ9Y263 795 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 ZDHHC9Q9Y397 364 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 CDY2AQ9Y6F7 541 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 ITIH6Q6UXX5 1313 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 ATMINO43313 823 aaPredicted RBP9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 CKMP06732 381 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 SLC27A1Q6PCB7 646 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 USP49Q70CQ1 688 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 TTC17Q96AE7 1141 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 SERPIND1P05546 499 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 PMS2P54278 862 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 BCAT1P54687 386 aa9.47□□□□□ -0.89
MTHFD1-202ENST00000545908 PKN1Q16512 942 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms