RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 PKN2Q16513 984 aaKnown RBP16.15■□□□□ 0.18
CNN3-207ENST00000545882 EAPPQ56P03 285 aaPredicted RBP16.15■□□□□ 0.18
CNN3-207ENST00000545882 XKR3Q5GH77 459 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 HP1BP3Q5SSJ5 553 aaPredicted RBP16.15■□□□□ 0.18
CNN3-207ENST00000545882 FAM47EQ6ZV65 393 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 TDRPQ86YL5 185 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 ANKRD35Q8N283 1001 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 ZNF526Q8TF50 670 aaPredicted RBP16.15■□□□□ 0.18
CNN3-207ENST00000545882 KLHL29Q96CT2 875 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 CFAP57Q96MR6 1250 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 CGRRF1Q99675 332 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 TARS2Q9BW92 718 aaKnown RBP16.15■□□□□ 0.18
CNN3-207ENST00000545882 KIF9Q9HAQ2 790 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 GRID1Q9ULK0 1009 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 IVNS1ABPQ9Y6Y0 642 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 ADGRA2Q96PE1 1338 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 EXOC1LA0A1B0GW35 172 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 GSTTP1A0A1W2PQM5 241 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 NFKBIEO00221 500 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 NF2P35240 595 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 ARSEP51690 589 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 SEZ6Q53EL9 994 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 SPOCD1Q6ZMY3 1216 aa16.15■□□□□ 0.18
CNN3-207ENST00000545882 LOC285556D6RIA3 1793 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 A0A0B4J269 797 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 SPATA31C2B4DYI2 1134 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 F8VP50 259 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 KRT1P04264 644 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 SUPT20HL2P0C7V6 817 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 RPS12P25398 132 aaKnown RBP16.14■□□□□ 0.17
CNN3-207ENST00000545882 ARL2P36404 184 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 IL9RQ01113 521 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 LMNB2Q03252 620 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 CCDC15Q0P6D6 951 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 OASLQ15646 514 aaKnown RBP16.14■□□□□ 0.17
CNN3-207ENST00000545882 WDR72Q3MJ13 1102 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 SUPT20HL1Q3ZLR7 823 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 RNASEH2BQ5TBB1 312 aaKnown RBP16.14■□□□□ 0.17
CNN3-207ENST00000545882 SNRNP48Q6IEG0 339 aaKnown RBP16.14■□□□□ 0.17
CNN3-207ENST00000545882 DEFB132Q7Z7B7 95 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 NSUN6Q8TEA1 469 aaKnown RBP16.14■□□□□ 0.17
CNN3-207ENST00000545882 SPOCK2Q92563 424 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 N4BP2L2Q92802 583 aaPredicted RBP16.14■□□□□ 0.17
CNN3-207ENST00000545882 GRAMD1AQ96CP6 724 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 RBM41Q96IZ5 413 aaKnown RBP16.14■□□□□ 0.17
CNN3-207ENST00000545882 PITPNM3Q9BZ71 974 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 PORCNQ9H237 461 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 KLHL14Q9P2G3 628 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 ZNF148Q9UQR1 794 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 DRG1Q9Y295 367 aaKnown RBP16.14■□□□□ 0.17
CNN3-207ENST00000545882 ANK1P16157 1881 aa16.14■□□□□ 0.17
CNN3-207ENST00000545882 hCG_1818297A0A087WSY0 165 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 POC1B-GALNT4F8VUJ3 575 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 HGSO14964 777 aaPredicted RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 PRPF4O43172 522 aaKnown RBP eCLIP16.13■□□□□ 0.17
CNN3-207ENST00000545882 CST3P01034 146 aaPredicted RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 ATF7P17544 494 aaPredicted RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 TBXAS1P24557 533 aaPredicted RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 ABCD1P33897 745 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 POLGP54098 1239 aaPredicted RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 PDE4CQ08493 712 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 GPS1Q13098 491 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 CEP128Q6ZU80 1094 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 JDP2Q8WYK2 163 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 ACSF2Q96CM8 615 aaPredicted RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 MSTO1Q9BUK6 570 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 TRABDQ9H4I3 376 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 DHX33Q9H6R0 707 aaKnown RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 FBXO40Q9UH90 709 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 ZNF214Q9UL59 606 aaPredicted RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 K7ERI5 159 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 ALOX15BO15296 676 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 TJP3O95049 919 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 NAMPTP43490 491 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 SLC18A1P54219 525 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 MCL1Q07820 350 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 NR1H3Q13133 447 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 MOGSQ13724 837 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 NCOA4Q13772 614 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 PPP1R15BQ5SWA1 713 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 LRRC38Q5VT99 294 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 SLFN12LQ6IEE8 588 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 RGS9BPQ6ZS82 235 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 WDTC1Q8N5D0 677 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 CCHCR1Q8TD31 782 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 UTP4Q969X6 686 aaKnown RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 TTC25Q96NG3 672 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 PAIP2Q9BPZ3 127 aaKnown RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 MYLK2Q9H1R3 596 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 UBN1Q9NPG3 1134 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 ANKFY1Q9P2R3 1169 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 ADAMTS5Q9UNA0 930 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 STARD13Q9Y3M8 1113 aa16.13■□□□□ 0.17
CNN3-207ENST00000545882 MAFBQ9Y5Q3 323 aaPredicted RBP16.13■□□□□ 0.17
CNN3-207ENST00000545882 LRRIQ4A6NIV6 560 aa16.12■□□□□ 0.17
CNN3-207ENST00000545882 TTLL13PA6NNM8 815 aa16.12■□□□□ 0.17
CNN3-207ENST00000545882 ANP32DO95626 131 aa16.12■□□□□ 0.17
CNN3-207ENST00000545882 LDHAP00338 332 aaKnown RBP16.12■□□□□ 0.17
CNN3-207ENST00000545882 PTPN7P35236 360 aa16.12■□□□□ 0.17
CNN3-207ENST00000545882 CETN2P41208 172 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms