RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 OAZ2O95190 189 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 SERPINC1P01008 464 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 CNPP09543 421 aaKnown RBP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 OR4Q2P0C623 313 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 TYMPP19971 482 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 ACAT1P24752 427 aaKnown RBP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 GTF2F1P35269 517 aaKnown RBP eCLIP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 TNNC1P63316 161 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 YWHAHQ04917 246 aaPredicted RBP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 ORC1Q13415 861 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 SYCP1Q15431 976 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 GLYCTKQ8IVS8 523 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 UBR7Q8N806 425 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 MRPL43Q8N983 215 aaKnown RBP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 APPL2Q8NEU8 664 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 WHAMMQ8TF30 809 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 DPEP3Q9H4B8 488 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 PUF60Q9UHX1 559 aaKnown RBP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 R3HCC1Q9Y3T6 440 aaKnown RBP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 IRAK3Q9Y616 596 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 TEX28O15482 410 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 HUS1O60921 280 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 CXCL14O95715 111 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 URODP06132 367 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 PBX1P40424 430 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 RBM10P98175 930 aaKnown RBP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 PSMD5Q16401 504 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 OVOS1Q6IE37 1185 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 GPR153Q6NV75 609 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 PPM1KQ8N3J5 372 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 DEFB123Q8N688 67 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 ANKRD20A12PQ8NF67 263 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 MRPL38Q96DV4 380 aaKnown RBP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 ERGIC2Q96RQ1 377 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 IMPG2Q9BZV3 1241 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 XPO4Q9C0E2 1151 aaKnown RBP17.44■□□□□ 0.38
LIMS2-217ENST00000545738 GANQ9H2C0 597 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 MTRRQ9UBK8 725 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 FBXL5Q9UKA1 691 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 MTCH2Q9Y6C9 303 aa17.44■□□□□ 0.38
LIMS2-217ENST00000545738 BRWD1Q9NSI6 2320 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 PER2O15055 1255 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 ATP2C2O75185 946 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 TACC1O75410 805 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 CD58P19256 250 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 ACO1P21399 889 aaKnown RBP17.43■□□□□ 0.38
LIMS2-217ENST00000545738 UBASH3AP57075 661 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 CUL2Q13617 745 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 KIAA1841Q6NSI8 718 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 LRRTM3Q86VH5 581 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 MYLIPQ8WY64 445 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 NT5C1BQ96P26 610 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 CDX2Q99626 313 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-217ENST00000545738 LSM14BQ9BX40 385 aaKnown RBP17.43■□□□□ 0.38
LIMS2-217ENST00000545738 RXFP1Q9HBX9 757 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 MRPL17Q9NRX2 175 aaKnown RBP17.43■□□□□ 0.38
LIMS2-217ENST00000545738 APEX2Q9UBZ4 518 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 FHOD1Q9Y613 1164 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 CDY1Q9Y6F8 540 aa17.43■□□□□ 0.38
LIMS2-217ENST00000545738 VNN2O95498 520 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 PNMA6AP0CW24 399 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-217ENST00000545738 WARSP23381 471 aaKnown RBP17.42■□□□□ 0.38
LIMS2-217ENST00000545738 TPM4P67936 248 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 CETN1Q12798 172 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 WDR44Q5JSH3 913 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 KLHDC7AQ5VTJ3 777 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 IQCEQ6IPM2 695 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 DPH6Q7L8W6 267 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 FEZF2Q8TBJ5 459 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 MICAL1Q8TDZ2 1067 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 PKMYT1Q99640 499 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 GPR88Q9GZN0 384 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 FAM207AQ9NSI2 230 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-217ENST00000545738 TMLHEQ9NVH6 421 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 MTMR10Q9NXD2 777 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 DDX43Q9NXZ2 648 aaKnown RBP17.42■□□□□ 0.38
LIMS2-217ENST00000545738 STXBP5LQ9Y2K9 1186 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 VCANP13611 3396 aa17.42■□□□□ 0.38
LIMS2-217ENST00000545738 CALCAP01258 141 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 PDGFRBP09619 1106 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 PAX3P23760 479 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 CA8P35219 290 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 PSMC1P62191 440 aaKnown RBP17.41■□□□□ 0.38
LIMS2-217ENST00000545738 INCA1Q0VD86 236 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 SMC1AQ14683 1233 aaKnown RBP17.41■□□□□ 0.38
LIMS2-217ENST00000545738 CTXN3Q4LDR2 81 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 ANKS3Q6ZW76 656 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 RBM23Q86U06 439 aaKnown RBP17.41■□□□□ 0.38
LIMS2-217ENST00000545738 TMEM86AQ8N2M4 240 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 KLHL5Q96PQ7 755 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 NAA15Q9BXJ9 866 aaKnown RBP17.41■□□□□ 0.38
LIMS2-217ENST00000545738 LMAN2LQ9H0V9 348 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 UBE2TQ9NPD8 197 aaPredicted RBP17.41■□□□□ 0.38
LIMS2-217ENST00000545738 NGRNQ9NPE2 291 aaKnown RBP17.41■□□□□ 0.38
LIMS2-217ENST00000545738 CRTAC1Q9NQ79 661 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 CISHQ9NSE2 258 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 WDR27A2RRH5 827 aa17.41■□□□□ 0.38
LIMS2-217ENST00000545738 RNF225M0QZC1 329 aaPredicted RBP17.41■□□□□ 0.38
LIMS2-217ENST00000545738 CILPO75339 1184 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms