RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 SMAD4Q13485 552 aaKnown RBP14.85□□□□□ -0.03
TSEN54-203ENST00000545228 WDR72Q3MJ13 1102 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 VWA3BQ502W6 1294 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 RNF168Q8IYW5 571 aaPredicted RBP14.85□□□□□ -0.03
TSEN54-203ENST00000545228 PIK3R5Q8WYR1 880 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 ZNF516Q92618 1163 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 NT5C1BQ96P26 610 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 MED15Q96RN5 788 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 MMS19Q96T76 1030 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 NDST4Q9H3R1 872 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 CBX8Q9HC52 389 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 SIX4Q9UIU6 781 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 SNX9Q9Y5X1 595 aa14.85□□□□□ -0.03
TSEN54-203ENST00000545228 ATG2AQ2TAZ0 1938 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 MTCL1Q9Y4B5 1905 aaKnown RBP14.84□□□□□ -0.03
TSEN54-203ENST00000545228 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.84□□□□□ -0.03
TSEN54-203ENST00000545228 OR6C75A6NL08 312 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 SERPINC1P01008 464 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 RFX1P22670 979 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 PCSK1P29120 753 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 GTF2F1P35269 517 aaKnown RBP eCLIP14.84□□□□□ -0.03
TSEN54-203ENST00000545228 NDUFV1P49821 464 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 MYL6P60660 151 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 SMARCB1Q12824 385 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 ADAM15Q13444 863 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 CAMK1Q14012 370 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 IQCB1Q15051 598 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 PSMD5Q16401 504 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 EXOC3L4Q17RC7 722 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 OVOS1Q6IE37 1185 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 ENOSF1Q7L5Y1 443 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 TMEM173Q86WV6 379 aaPredicted RBP14.84□□□□□ -0.03
TSEN54-203ENST00000545228 DHX40Q8IX18 779 aaKnown RBP14.84□□□□□ -0.03
TSEN54-203ENST00000545228 C3orf58Q8NDZ4 430 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 GPR62Q9BZJ7 368 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 NIF3L1Q9GZT8 377 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 CYP3A43Q9HB55 503 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 CHST7Q9NS84 486 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 GCNT4Q9P109 453 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 FNIP2Q9P278 1114 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 LIMA1Q9UHB6 759 aaKnown RBP14.84□□□□□ -0.03
TSEN54-203ENST00000545228 CD207Q9UJ71 328 aa14.84□□□□□ -0.03
TSEN54-203ENST00000545228 LINC01565O15544 149 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 TACC1O75410 805 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 CXCL14O95715 111 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 ZNF18P17022 549 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 BRCC3P46736 316 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 TSPY1Q01534 308 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 NCAPHQ15003 741 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 KRT31Q15323 416 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 MAPRE1Q15691 268 aaKnown RBP14.83□□□□□ -0.04
TSEN54-203ENST00000545228 CBWD6Q4V339 395 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 CBWD3Q5JTY5 395 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 CBWD5Q5RIA9 395 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 C1orf220Q5T0J3 134 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 PLPP4Q5VZY2 271 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 IRF2BP1Q8IU81 584 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 ADGRF2Q8IZF7 708 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 CXorf38Q8TB03 319 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 TAS1R2Q8TE23 839 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 RIN2Q8WYP3 895 aaPredicted RBP14.83□□□□□ -0.04
TSEN54-203ENST00000545228 RABGGTAQ92696 567 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 SNX25Q9H3E2 840 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 CACNG4Q9UBN1 327 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 NXF1Q9UBU9 619 aaKnown RBP14.83□□□□□ -0.04
TSEN54-203ENST00000545228 BACE2Q9Y5Z0 518 aa14.83□□□□□ -0.04
TSEN54-203ENST00000545228 PPEF2O14830 753 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 FSCN2O14926 492 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 CBFA2T2O43439 604 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 OAZ2O95190 189 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 VNN1O95497 513 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 EFEMP2O95967 443 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 CST3P01034 146 aaPredicted RBP14.82□□□□□ -0.04
TSEN54-203ENST00000545228 DNAJB1P25685 340 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 TKTP29401 623 aaKnown RBP14.82□□□□□ -0.04
TSEN54-203ENST00000545228 COPB1P53618 953 aaKnown RBP14.82□□□□□ -0.04
TSEN54-203ENST00000545228 PTPN14Q15678 1187 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 CTXN3Q4LDR2 81 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 HSP90AA4PQ58FG1 418 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 VARS2Q5ST30 1063 aaKnown RBP14.82□□□□□ -0.04
TSEN54-203ENST00000545228 LUZP1Q86V48 1076 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 FMNL3Q8IVF7 1028 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 MRPL43Q8N983 215 aaKnown RBP14.82□□□□□ -0.04
TSEN54-203ENST00000545228 BCL7CQ8WUZ0 217 aaPredicted RBP14.82□□□□□ -0.04
TSEN54-203ENST00000545228 JAKMIP2Q96AA8 810 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 TNIP3Q96KP6 325 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 XYLT2Q9H1B5 865 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 MTRRQ9UBK8 725 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 MAFFQ9ULX9 164 aa14.82□□□□□ -0.04
TSEN54-203ENST00000545228 LRRC10BA6NIK2 292 aa14.81□□□□□ -0.04
TSEN54-203ENST00000545228 LGALS16A8MUM7 142 aa14.81□□□□□ -0.04
TSEN54-203ENST00000545228 C2CD2LO14523 706 aa14.81□□□□□ -0.04
TSEN54-203ENST00000545228 WARSP23381 471 aaKnown RBP14.81□□□□□ -0.04
TSEN54-203ENST00000545228 RTL10Q7L3V2 364 aa14.81□□□□□ -0.04
TSEN54-203ENST00000545228 ALYREFQ86V81 257 aaKnown RBP14.81□□□□□ -0.04
TSEN54-203ENST00000545228 UNC93AQ86WB7 457 aa14.81□□□□□ -0.04
TSEN54-203ENST00000545228 RNF135Q8IUD6 432 aa14.81□□□□□ -0.04
TSEN54-203ENST00000545228 DCP1BQ8IZD4 617 aaKnown RBP14.81□□□□□ -0.04
TSEN54-203ENST00000545228 EFHBQ8N7U6 833 aa14.81□□□□□ -0.04
TSEN54-203ENST00000545228 EHBP1Q8NDI1 1231 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms