RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 FBXL18Q96ME1 805 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 RIPOR3Q96MK2 946 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 ZMAT2Q96NC0 199 aaKnown RBP8□□□□□ -1.13
CPSF7-224ENST00000544990 NECTIN4Q96NY8 510 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 C2orf49Q9BVC5 232 aaPredicted RBP8□□□□□ -1.13
CPSF7-224ENST00000544990 APOL5Q9BWW9 433 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 PHF7Q9BWX1 381 aaPredicted RBP8□□□□□ -1.13
CPSF7-224ENST00000544990 S1PR5Q9H228 398 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 ADAM7Q9H2U9 754 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 ASB7Q9H672 318 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 SFXN1Q9H9B4 322 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 GOLGA2P5Q9HBQ8 144 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 CPSF3Q9UKF6 684 aaKnown RBP8□□□□□ -1.13
CPSF7-224ENST00000544990 USP15Q9Y4E8 981 aaPredicted RBP8□□□□□ -1.13
CPSF7-224ENST00000544990 HRH3Q9Y5N1 445 aa8□□□□□ -1.13
CPSF7-224ENST00000544990 REV3LO60673 3130 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 NCOR1O75376 2440 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 A0A1W2PQ27 194 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 A0A1W2PQ64 194 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 A0A1W2PQD8 194 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 GOLGA6L4A6NEF3 574 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 SYN3O14994 580 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 EIF3DO15371 548 aaKnown RBP eCLIP7.99□□□□□ -1.13
CPSF7-224ENST00000544990 FAM189A1O60320 539 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 PRPF6O94906 941 aaKnown RBP7.99□□□□□ -1.13
CPSF7-224ENST00000544990 IL18RAPO95256 599 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 MYL1P05976 194 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 ADRB2P07550 413 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 MYBP10242 640 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 PFKFB1P16118 471 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 FGFR3P22607 806 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 PAX3P23760 479 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 LRPAP1P30533 357 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 MCM4P33991 863 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 NOS2P35228 1153 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 SYKP43405 635 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 BRCC3P46736 316 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 ACOT2P49753 483 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 PLXNA3P51805 1871 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 CASP5P51878 434 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 MARSP56192 900 aaKnown RBP7.99□□□□□ -1.13
CPSF7-224ENST00000544990 ZP2Q05996 745 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 SPAG1Q07617 926 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 CBX2Q14781 532 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-224ENST00000544990 ZBTB6Q15916 424 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 ENOX2Q16206 610 aaKnown RBP7.99□□□□□ -1.13
CPSF7-224ENST00000544990 RTP2Q5QGT7 225 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 FAM26FQ5R3K3 315 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 RARS2Q5T160 578 aaKnown RBP7.99□□□□□ -1.13
CPSF7-224ENST00000544990 ARMCX5Q6P1M9 558 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 PRSS55Q6UWB4 352 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-224ENST00000544990 ANKS3Q6ZW76 656 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 PALB2Q86YC2 1186 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 NT5DC4Q86YG4 428 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 BEST2Q8NFU1 509 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 LNX1Q8TBB1 728 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-224ENST00000544990 RHBDD1Q8TEB9 315 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 SUSD6Q92537 303 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 CCDC47Q96A33 483 aaKnown RBP7.99□□□□□ -1.13
CPSF7-224ENST00000544990 C18orf25Q96B23 403 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-224ENST00000544990 B3GALT6Q96L58 329 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 BLZF1Q9H2G9 400 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 PLEKHA4Q9H4M7 779 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 MAN1C1Q9NR34 630 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 DERAQ9Y315 318 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 VWA8A3KMH1 1905 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 VCANP13611 3396 aa7.99□□□□□ -1.13
CPSF7-224ENST00000544990 ANK1P16157 1881 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 ARHGEF37A1IGU5 675 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 TISP43B9A030 160 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 H7C4K7 107 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 MEFVO15553 781 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 TGM5O43548 720 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 EXTL3O43909 919 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 RPL17P18621 184 aaKnown RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 TKTP29401 623 aaKnown RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 ADSSP30520 456 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 RNF144AP50876 292 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 SNRPFP62306 86 aaKnown RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 PSMD2Q13200 908 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 CUL4BQ13620 913 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 TMEM132DQ14C87 1099 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 ZBTB41Q5SVQ8 909 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 SPATA1Q5VX52 437 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 JADE1Q6IE81 842 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 CD300LGQ6UXG3 332 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 CYP26C1Q6V0L0 522 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 C15orf39Q6ZRI6 1047 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 GPR149Q86SP6 731 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 LINC00528Q8N1L1 170 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 GPD1LQ8N335 351 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 C12orf76Q8N812 135 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 C3orf58Q8NDZ4 430 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 APPL2Q8NEU8 664 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 CMASQ8NFW8 434 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 ZNF507Q8TCN5 953 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 NOC3LQ8WTT2 800 aaKnown RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 CACTINQ8WUQ7 758 aaKnown RBP7.98□□□□□ -1.13
CPSF7-224ENST00000544990 PAGE5Q96GU1 130 aa7.98□□□□□ -1.13
CPSF7-224ENST00000544990 CHAMP1Q96JM3 812 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms