RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 ACSL3O95573 720 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 SCTRP47872 440 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 VCPP55072 806 aaKnown RBP13.17□□□□□ -0.3
PAAF1-215ENST00000544909 SP4Q02446 784 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 OASLQ15646 514 aaKnown RBP13.17□□□□□ -0.3
PAAF1-215ENST00000544909 TAZQ16635 292 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 SPOPLQ6IQ16 392 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 MPZL3Q6UWV2 235 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 CKAP2Q8WWK9 683 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 PRMT1Q99873 361 aaKnown RBP13.17□□□□□ -0.3
PAAF1-215ENST00000544909 HERPUD2Q9BSE4 406 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 MIS12Q9H081 205 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 LRRC4CQ9HCJ2 640 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 CISHQ9NSE2 258 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
PAAF1-215ENST00000544909 R3HDM2Q9Y2K5 976 aaKnown RBP13.17□□□□□ -0.3
PAAF1-215ENST00000544909 hCG_1818297A0A087WSY0 165 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 ACKR2O00590 384 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 PRKCBP05771 671 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 CHKAP35790 457 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 TCF7P36402 384 aaPredicted RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 TRPC3Q13507 836 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 SNX1Q13596 522 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 ACVR2BQ13705 512 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 LONRF1Q17RB8 773 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 LMBRD2Q68DH5 695 aaPredicted RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 DCUN1D2Q6PH85 259 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 TRPM8Q7Z2W7 1104 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 LRRC34Q8IZ02 419 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 GPC2Q8N158 579 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 DYDC1Q8WWB3 177 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 ANKRD36BP1Q96IX9 119 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 ZBTB45Q96K62 511 aaPredicted RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 MAGEB18Q96M61 343 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 RBM15Q96T37 977 aaKnown RBP eCLIP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 DDX23Q9BUQ8 820 aaKnown RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 SPATC1LQ9H0A9 340 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 FZD8Q9H461 694 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 PTPRHQ9HD43 1115 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 NKIRAS1Q9NYS0 192 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 SLC24A2Q9UI40 661 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 SMG5Q9UPR3 1016 aaKnown RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 USP15Q9Y4E8 981 aaPredicted RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 SIGLEC16A6NMB1 481 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 CHUKO15111 745 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 PRPF4O43172 522 aaKnown RBP eCLIP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 CAPN15O75808 1086 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 TNNC2P02585 160 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 ATICP31939 592 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 SKIV2L2P42285 1042 aaKnown RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 MAGEA4P43358 317 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 KYNUQ16719 465 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 HADHQ16836 314 aaKnown RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 FAM187BQ17R55 369 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 WDR78Q5VTH9 848 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 SPOCD1Q6ZMY3 1216 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 SEPT14Q6ZU15 432 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 GSTA5Q7RTV2 222 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 RPAINQ86UA6 219 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 ERICH1Q86X53 443 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 THNSL1Q8IYQ7 743 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 SLC35B2Q8TB61 432 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 BCO2Q9BYV7 579 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 XYLT2Q9H1B5 865 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 CYP3A43Q9HB55 503 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 KLC4Q9NSK0 619 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 TPX2Q9ULW0 747 aaKnown RBP13.16□□□□□ -0.3
PAAF1-215ENST00000544909 GJA3Q9Y6H8 435 aa13.16□□□□□ -0.3
PAAF1-215ENST00000544909 MAGEB2O15479 319 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 KRT1P04264 644 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 VIMP08670 466 aaKnown RBP13.15□□□□□ -0.3
PAAF1-215ENST00000544909 HOXC6P09630 235 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 CDKN2BP42772 138 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 SLCO1A2P46721 670 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 CCDC15Q0P6D6 951 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 LAMTOR4Q0VGL1 99 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 RIPK1Q13546 671 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 ZNF699Q32M78 642 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 CENPUQ71F23 418 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 VSIG1Q86XK7 387 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 MTMR12Q9C0I1 747 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 SLC40A1Q9NP59 571 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 GGA3Q9NZ52 723 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 TNFSF13BQ9Y275 285 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 TELO2Q9Y4R8 837 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 SNCAIPQ9Y6H5 919 aa13.15□□□□□ -0.3
PAAF1-215ENST00000544909 FAM47DPA6NHR8 397 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 SMIM23A6NLE4 172 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 DNM1LO00429 736 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 ALOX15BO15296 676 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 GJB6O95452 261 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 STAU1O95793 577 aaKnown RBP13.14□□□□□ -0.31
PAAF1-215ENST00000544909 BRAFP15056 766 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 ASPAP45381 313 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 CNTN2Q02246 1040 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 ZNF252P-AS1Q0IIN9 211 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms