RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ARF4P18085 180 aaPredicted RBP7.12□□□□□ -1.27
CDCA3-209ENST00000544610 GLRA2P23416 452 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 HOXD13P35453 343 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 CREMQ03060 361 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 NCBP1Q09161 790 aaKnown RBP7.12□□□□□ -1.27
CDCA3-209ENST00000544610 CCDC173Q0VFZ6 552 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 STRN3Q13033 797 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 HTR4Q13639 388 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 CAPSQ13938 189 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 MAPK6Q16659 721 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 USP41Q3LFD5 358 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 HS1BP3Q53T59 392 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 TCP11X2Q5H9J9 407 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 ANKRD40Q6AI12 368 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 PHLDB3Q6NSJ2 640 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 FUT10Q6P4F1 479 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 LILRA6Q6PI73 481 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 HACE1Q8IYU2 909 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 DEPTORQ8TB45 409 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 LRRN4Q8WUT4 740 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 CPB2Q96IY4 423 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 PPP1R9BQ96SB3 815 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 COLEC11Q9BWP8 271 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 MRPL4Q9BYD3 311 aaKnown RBP7.12□□□□□ -1.27
CDCA3-209ENST00000544610 GPR62Q9BZJ7 368 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 PRKD2Q9BZL6 878 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 CCDC113Q9H0I3 377 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 SEMA4AQ9H3S1 761 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 NXF3Q9H4D5 531 aaKnown RBP7.12□□□□□ -1.27
CDCA3-209ENST00000544610 ZHX3Q9H4I2 956 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 TBC1D17Q9HA65 648 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 ARHGEF3Q9NR81 526 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 SLC2A4RGQ9NR83 387 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 AGPAT3Q9NRZ7 376 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 PRMT7Q9NVM4 692 aaPredicted RBP7.12□□□□□ -1.27
CDCA3-209ENST00000544610 FANCLQ9NW38 375 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 MIOSQ9NXC5 875 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDCA3-209ENST00000544610 DLGAP2Q9P1A6 1054 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 FNIP2Q9P278 1114 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 IMPACTQ9P2X3 320 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 MAGEC2Q9UBF1 373 aaPredicted RBP7.12□□□□□ -1.27
CDCA3-209ENST00000544610 ADAM28Q9UKQ2 775 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 CA14Q9ULX7 337 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 CTNND2Q9UQB3 1225 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 CACNA1HO95180 2353 aa7.12□□□□□ -1.27
CDCA3-209ENST00000544610 ITIH6Q6UXX5 1313 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 A0A1B0GTH6 734 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 CCDC169A6NNP5 214 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 INO80B-WBP1J3KQ70 363 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 P4HA2O15460 535 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 TGFB1I1O43294 461 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 TOM1L1O75674 476 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 LMNAP02545 664 aaKnown RBP7.11□□□□□ -1.27
CDCA3-209ENST00000544610 SPATA31D3P0C874 917 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 MYBP10242 640 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 GTF2H1P32780 548 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 PSMC2P35998 433 aaKnown RBP7.11□□□□□ -1.27
CDCA3-209ENST00000544610 GCGRP47871 477 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 CASP5P51878 434 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 RAD51AP2Q09MP3 1159 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 GRIK3Q13003 919 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 ADAM9Q13443 819 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 TRIM14Q14142 442 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 FIGNQ5HY92 759 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 ISM2Q6H9L7 571 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 KLHL10Q6JEL2 608 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 SLC27A1Q6PCB7 646 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 SPATA31D4Q6ZUB0 917 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 INTS8Q75QN2 995 aaKnown RBP7.11□□□□□ -1.27
CDCA3-209ENST00000544610 GET4Q7L5D6 327 aaPredicted RBP7.11□□□□□ -1.27
CDCA3-209ENST00000544610 APTXQ7Z2E3 356 aaKnown RBP7.11□□□□□ -1.27
CDCA3-209ENST00000544610 PALB2Q86YC2 1186 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 IRF2BP1Q8IU81 584 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 FMNL3Q8IVF7 1028 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 TRIM59Q8IWR1 403 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 SMYD4Q8IYR2 804 aaPredicted RBP7.11□□□□□ -1.27
CDCA3-209ENST00000544610 SYCP3Q8IZU3 236 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 RNF214Q8ND24 703 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 GPR152Q8TDT2 470 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 ASAP3Q8TDY4 903 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 RIN2Q8WYP3 895 aaPredicted RBP7.11□□□□□ -1.27
CDCA3-209ENST00000544610 B3GALT6Q96L58 329 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 APOL6Q9BWW8 343 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 SRRTQ9BXP5 876 aaKnown RBP7.11□□□□□ -1.27
CDCA3-209ENST00000544610 EDEM3Q9BZQ6 932 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 TRIM6Q9C030 488 aaPredicted RBP7.11□□□□□ -1.27
CDCA3-209ENST00000544610 PIDD1Q9HB75 910 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 LHX6Q9UPM6 363 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 FRMD4BQ9Y2L6 1034 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 ZFP37Q9Y6Q3 630 aaPredicted RBP7.11□□□□□ -1.27
CDCA3-209ENST00000544610 NUMBLQ9Y6R0 609 aa7.11□□□□□ -1.27
CDCA3-209ENST00000544610 SF3B1O75533 1304 aaKnown RBP eCLIP7.1□□□□□ -1.27
CDCA3-209ENST00000544610 A0A087WWV3 80 aa7.1□□□□□ -1.27
CDCA3-209ENST00000544610 A0A0B4J269 797 aa7.1□□□□□ -1.27
CDCA3-209ENST00000544610 A0A1B0GUA9 196 aa7.1□□□□□ -1.27
CDCA3-209ENST00000544610 LGALS16A8MUM7 142 aa7.1□□□□□ -1.27
CDCA3-209ENST00000544610 GOLGA6L6A8MZA4 724 aa7.1□□□□□ -1.27
CDCA3-209ENST00000544610 KCNJ18B7U540 433 aa7.1□□□□□ -1.27
CDCA3-209ENST00000544610 C3orf80F5H4A9 247 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms