RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 ZNF394Q53GI3 561 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 BEND6Q5SZJ8 279 aaPredicted RBP13.55□□□□□ -0.24
PAAF1-214ENST00000544552 DCAF12L1Q5VU92 463 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 FAM228AQ86W67 206 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 PASD1Q8IV76 773 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 WDTC1Q8N5D0 677 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 SLC4A11Q8NBS3 891 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 ALG3Q92685 438 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 TMEM176AQ96HP8 235 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 C11orf70Q9BRQ4 267 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 NXF3Q9H4D5 531 aaKnown RBP13.55□□□□□ -0.24
PAAF1-214ENST00000544552 SMYD3Q9H7B4 428 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 PARVAQ9NVD7 372 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 CHORDC1Q9UHD1 332 aaPredicted RBP13.55□□□□□ -0.24
PAAF1-214ENST00000544552 ANAPC7Q9UJX3 599 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 NOC2LQ9Y3T9 749 aaKnown RBP13.55□□□□□ -0.24
PAAF1-214ENST00000544552 HES2Q9Y543 173 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 CDY2AQ9Y6F7 541 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 SMIM28A0A1B0GU29 152 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 ELNP15502 786 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 ATF7P17544 494 aaPredicted RBP13.54□□□□□ -0.24
PAAF1-214ENST00000544552 GUCY2FP51841 1108 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 TAP1Q03518 808 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
PAAF1-214ENST00000544552 CNGA2Q16280 664 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 PTPROQ16827 1216 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 LONRF2Q1L5Z9 754 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 MAP9Q49MG5 647 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 C8orf74Q6P047 294 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 CCNI2Q6ZMN8 369 aaPredicted RBP13.54□□□□□ -0.24
PAAF1-214ENST00000544552 MMS22LQ6ZRQ5 1243 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 RNPC3Q96LT9 517 aaKnown RBP13.54□□□□□ -0.24
PAAF1-214ENST00000544552 SENP6Q9GZR1 1112 aaPredicted RBP13.54□□□□□ -0.24
PAAF1-214ENST00000544552 FAM53CQ9NYF3 392 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 L1RE1Q9UN81 338 aa13.54□□□□□ -0.24
PAAF1-214ENST00000544552 TCRBV5S1A1TA0A578 114 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 FAM170AA1A519 330 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 PIRO00625 290 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 TLR3O15455 904 aaKnown RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 SPOPO43791 374 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 PROSCO94903 275 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 TNFRSF8P28908 595 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 MAN1A1P33908 653 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 RAP1GAPP47736 663 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 RNASE9P60153 205 aaKnown RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 MGAT3Q09327 533 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 STILQ15468 1287 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 CTU1Q7Z7A3 348 aaKnown RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 SMG8Q8ND04 991 aaKnown RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 SLAIN1Q8ND83 568 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 FEZF2Q8TBJ5 459 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 KRT35Q92764 455 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 ELOVL4Q9GZR5 314 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 STIM2Q9P246 746 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 DDX20Q9UHI6 824 aaKnown RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 STRIP2Q9ULQ0 834 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 PTPN22Q9Y2R2 807 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 IPPQ9Y573 584 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 GRIN2DO15399 1336 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 TMEM110-MUSTN1A8MSY1 372 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 KRIT1O00522 736 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 FGGP02679 453 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 CHRNA1P02708 482 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 CD19P15391 556 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 AKAP5P24588 427 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 PNPLA4P41247 253 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 GSCP56915 257 aaPredicted RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 RWDD2BP57060 319 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 C9orf57Q5W0N0 161 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 RNF180Q86T96 592 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 ERICH1Q86X53 443 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 EIF1ADQ8N9N8 165 aaKnown RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 C1orf131Q8NDD1 294 aaKnown RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 BTBD6Q96KE9 485 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 TWNKQ96RR1 684 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 NT5C1AQ9BXI3 368 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 FUT8Q9BYC5 575 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 CXCL16Q9H2A7 254 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 SLITRK6Q9H5Y7 841 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 OGFRQ9NZT2 677 aa13.53□□□□□ -0.24
PAAF1-214ENST00000544552 DMGDHQ9UI17 866 aaKnown RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 PDCD11Q14690 1871 aaKnown RBP13.53□□□□□ -0.24
PAAF1-214ENST00000544552 TMEM191CA6NGB0 347 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 MAP2K7O14733 419 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 GPR182O15218 404 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 SEC31AO94979 1220 aaKnown RBP13.52□□□□□ -0.25
PAAF1-214ENST00000544552 FAM163BP0C2L3 166 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 GRK4P32298 578 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 PKN2Q16513 984 aaKnown RBP13.52□□□□□ -0.25
PAAF1-214ENST00000544552 FAM47CQ5HY64 1035 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 TWF2Q6IBS0 349 aaKnown RBP13.52□□□□□ -0.25
PAAF1-214ENST00000544552 DENND1BQ6P3S1 775 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 UNC93AQ86WB7 457 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 IFT20Q8IY31 132 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 TMEM130Q8N3G9 435 aa13.52□□□□□ -0.25
PAAF1-214ENST00000544552 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms