RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 APLFQ8IW19 511 aaPredicted RBP10.85□□□□□ -0.67
PCDH9-204ENST00000544246 C2orf69Q8N8R5 385 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 MOSPD2Q8NHP6 518 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 COPRSQ9NQ92 184 aa10.85□□□□□ -0.67
PCDH9-204ENST00000544246 PIPSLA2A3N6 862 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 MAGEA13PA6NCF6 341 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 DNALI1O14645 258 aaPredicted RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 PTK6Q13882 451 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 LONRF1Q17RB8 773 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 MMP19Q99542 508 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 BPIFA3Q9BQP9 254 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 PRRG3Q9BZD7 231 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 OSBPL6Q9BZF3 934 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 RAVER2Q9HCJ3 691 aaKnown RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 NMRK1Q9NWW6 199 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 SYNMO15061 1565 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 CENPXA8MT69 81 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 ZBTB5O15062 677 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 VHLP40337 213 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 MAGEA10P43363 369 aaPredicted RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 NT5C2P49902 561 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 PKN2Q16513 984 aaKnown RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 KBTBD12Q3ZCT8 623 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 MFSD14CQ5VZR4 134 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 ARMC3Q5W041 872 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 LAYNQ6UX15 382 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 DEFB132Q7Z7B7 95 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 SLC25A41Q8N5S1 370 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 NSUN6Q8TEA1 469 aaKnown RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 SCFD2Q8WU76 684 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 PPP2R3CQ969Q6 453 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 SGSM3Q96HU1 749 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 RNPC3Q96LT9 517 aaKnown RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 MYLK2Q9H1R3 596 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 IARS2Q9NSE4 1012 aaKnown RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 KLHL11Q9NVR0 708 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 POTEMA6NI47 508 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 DYRK3O43781 588 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 SYNCRIPO60506 623 aaKnown RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 RAD17O75943 681 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 P4HBP07237 508 aaKnown RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 IRF1P10914 325 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 HOXD10P28358 340 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 CRKLP46109 303 aaKnown RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 CUL4AQ13619 759 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 FUT11Q495W5 492 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 UGT3A1Q6NUS8 523 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 GLYCTKQ8IVS8 523 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 CYP4Z2PQ8N1L4 340 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 UXS1Q8NBZ7 420 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 NSL1Q96IY1 281 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 KLHL20Q9Y2M5 609 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 MYO3BQ8WXR4 1341 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 FAM47DPA6NHR8 397 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 H7C0S8 307 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 TRAPPC3O43617 180 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 JAK1P23458 1154 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 KRT20P35900 424 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 PRCPP42785 496 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 PCSK7Q16549 785 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 GSTA3Q16772 222 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 SWSAP1Q6NVH7 229 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 CDH24Q86UP0 819 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 LBHD1Q9BQE6 289 aaPredicted RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 KIFC1Q9BW19 673 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 TLR7Q9NYK1 1049 aaKnown RBP10.84□□□□□ -0.67
PCDH9-204ENST00000544246 ZSWIM5Q9P217 1185 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 STAP2Q9UGK3 403 aa10.84□□□□□ -0.67
PCDH9-204ENST00000544246 DYTNA2CJ06 578 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 PLEKHA8P1O95397 391 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 ITIH2P19823 946 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 VSNL1P62760 191 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 TRIM32Q13049 653 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 KYNUQ16719 465 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 ZRANB3Q5FWF4 1079 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 CIAPIN1Q6FI81 312 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 SLC25A24Q6NUK1 477 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 ERP27Q96DN0 273 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 MED15Q96RN5 788 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 ERAP1Q9NZ08 941 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 GABBR1Q9UBS5 961 aa10.83□□□□□ -0.67
PCDH9-204ENST00000544246 APRTP07741 180 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 ATP6V1B1P15313 513 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 ATP6V1C1P21283 382 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 STILQ15468 1287 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 DUOXA2Q1HG44 320 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 ERFEQ4G0M1 354 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF579Q8NAF0 562 aaKnown RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 FAM20AQ96MK3 541 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 SPATA33Q96N06 139 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 UBXN6Q9BZV1 441 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 RERGLQ9H628 205 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.83□□□□□ -0.68
PCDH9-204ENST00000544246 HPS5Q9UPZ3 1129 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 PPP1R37O75864 691 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 SOAT2O75908 522 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 ACADSP16219 412 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 MAPK1P28482 360 aa10.83□□□□□ -0.68
PCDH9-204ENST00000544246 CSNK2BP67870 215 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms