RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 OR6B3Q8NGW1 331 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 LMO3Q8TAP4 145 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 MRPL45Q9BRJ2 306 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 SNX25Q9H3E2 840 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TLE6Q9H808 572 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 MTMR10Q9NXD2 777 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 DDX43Q9NXZ2 648 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 MTRRQ9UBK8 725 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CDH23Q9H251 3354 aa15.5■□□□□ 0.07
TNFRSF1A-216ENST00000543995 LGALS16A8MUM7 142 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PER2O15055 1255 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TACC1O75410 805 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ADH1AP07327 375 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CNPP09543 421 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 WEE2P0C1S8 567 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 FOSL2P15408 326 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 KLRC2P26717 231 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 NRIP1P48552 1158 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 NDUFV1P49821 464 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CDH8P55286 799 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 FANCCQ00597 558 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 MRPL58Q14197 206 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 APTXQ7Z2E3 356 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ADGRD2Q7Z7M1 963 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PPM1KQ8N3J5 372 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 SPATA18Q8TC71 538 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PCMTD1Q96MG8 357 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 KLHL5Q96PQ7 755 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 OXCT2Q9BYC2 517 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 BCO2Q9BYV7 579 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 FNIP2Q9P278 1114 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 FBXL5Q9UKA1 691 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 BACE2Q9Y5Z0 518 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CDY1Q9Y6F8 540 aa15.49■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TEX28O15482 410 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CPB1P15086 417 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CD58P19256 250 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 POU3F3P20264 500 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 WARSP23381 471 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TBXAS1P24557 533 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PON1P27169 355 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 OR1D2P34982 312 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 GNL1P36915 607 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CUL2Q13617 745 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TCEAL5Q5H9L2 206 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 LIMS2Q7Z4I7 341 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 OSTM1Q86WC4 334 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 GAS2L3Q86XJ1 694 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 KBTBD7Q8WVZ9 684 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 FAXDC2Q96IV6 333 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CLSTN3Q9BQT9 956 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 RBSNQ9H1K0 784 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 IGFLR1Q9H665 355 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CYP3A43Q9HB55 503 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 RXFP1Q9HBX9 757 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 MYO7AQ13402 2215 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 OR6C75A6NL08 312 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PDGFRBP09619 1106 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 FAM163BP0C2L3 166 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ACAT1P24752 427 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PCSK1P29120 753 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 UBASH3AP57075 661 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PLCB2Q00722 1185 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TSPY1Q01534 308 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 KCNMA1Q12791 1236 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 RSPO2Q6UXX9 243 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 RRAGAQ7L523 313 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PALB2Q86YC2 1186 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ARHGEF19Q8IW93 802 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 NAP1L5Q96NT1 182 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ARID3AQ99856 593 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 LSM14BQ9BX40 385 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 SDCBP2Q9H190 292 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 RTN4Q9NQC3 1192 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 STXBP5LQ9Y2K9 1186 aa15.48■□□□□ 0.07
TNFRSF1A-216ENST00000543995 A0A1B0GTH6 734 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 A8MXQ7 604 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 GABRDO14764 452 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ADAM12O43184 909 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TBC1D4O60343 1298 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 CLASP2O75122 1294 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 OR4Q2P0C623 313 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 TRIM21P19474 475 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 LMO2P25791 158 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 YWHAEP62258 255 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 DUSP6Q16828 381 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 SLC8B1Q6J4K2 584 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PHLDB3Q6NSJ2 640 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PPFIBP1Q86W92 1011 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 OR10T2Q8NGX3 314 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 RTP3Q9BQQ7 232 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ACBD6Q9BR61 282 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 UBE2TQ9NPD8 197 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 APEX2Q9UBZ4 518 aa15.47■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PLXNA3P51805 1871 aa15.46■□□□□ 0.07
TNFRSF1A-216ENST00000543995 PRRC2BQ5JSZ5 2229 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1A-216ENST00000543995 HCRTO43612 131 aa15.46■□□□□ 0.07
TNFRSF1A-216ENST00000543995 NDST1P52848 882 aa15.46■□□□□ 0.07
TNFRSF1A-216ENST00000543995 MFAP3P55082 362 aa15.46■□□□□ 0.07
TNFRSF1A-216ENST00000543995 ROR1Q01973 937 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms