RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 TPM2P07951 284 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 P4HA1P13674 534 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 COPB1P53618 953 aaKnown RBP14.6□□□□□ -0.07
SP140-213ENST00000543928 TPM4P67936 248 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 DUSP6Q16828 381 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 RSPO2Q6UXX9 243 aaPredicted RBP14.6□□□□□ -0.07
SP140-213ENST00000543928 SCARA5Q6ZMJ2 495 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 LIMS2Q7Z4I7 341 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 OSTM1Q86WC4 334 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 EHBP1Q8NDI1 1231 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 LMO3Q8TAP4 145 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 CLSTN3Q9BQT9 956 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 MRPL45Q9BRJ2 306 aaKnown RBP14.6□□□□□ -0.07
SP140-213ENST00000543928 CRACR2AQ9BSW2 395 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 NIF3L1Q9GZT8 377 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 VPS16Q9H269 839 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 SMYD3Q9H7B4 428 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 GCNT4Q9P109 453 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 FBXL5Q9UKA1 691 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 CDY1Q9Y6F8 540 aa14.6□□□□□ -0.07
SP140-213ENST00000543928 GTPBP10A4D1E9 387 aaKnown RBP14.59□□□□□ -0.07
SP140-213ENST00000543928 TBC1D4O60343 1298 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 CLASP2O75122 1294 aaKnown RBP14.59□□□□□ -0.07
SP140-213ENST00000543928 TACC1O75410 805 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 ADH1AP07327 375 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 KLRC2P26717 231 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 OR1D2P34982 312 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 GTF2F1P35269 517 aaKnown RBP eCLIP14.59□□□□□ -0.07
SP140-213ENST00000543928 ASPAP45381 313 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 RAP1GAPP47736 663 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 NDUFV1P49821 464 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 CDH8P55286 799 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 HYAL1Q12794 435 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 LRMPQ12912 555 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 CCDC85BQ15834 202 aaPredicted RBP14.59□□□□□ -0.07
SP140-213ENST00000543928 GBP6Q6ZN66 633 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 APTXQ7Z2E3 356 aaKnown RBP14.59□□□□□ -0.07
SP140-213ENST00000543928 THEM5Q8N1Q8 247 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 RNF214Q8ND24 703 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 SPATA18Q8TC71 538 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 KBTBD7Q8WVZ9 684 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 TATDN2Q93075 761 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 RTP3Q9BQQ7 232 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 INTS2Q9H0H0 1204 aaKnown RBP14.59□□□□□ -0.07
SP140-213ENST00000543928 SDCBP2Q9H190 292 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 IGFLR1Q9H665 355 aa14.59□□□□□ -0.07
SP140-213ENST00000543928 DDX43Q9NXZ2 648 aaKnown RBP14.59□□□□□ -0.07
SP140-213ENST00000543928 LRRC10BA6NIK2 292 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 OR6C75A6NL08 312 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 GABRDO14764 452 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 HCRTO43612 131 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 WEE2P0C1S8 567 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 FAM163BP0C2L3 166 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 WARSP23381 471 aaKnown RBP14.58□□□□□ -0.08
SP140-213ENST00000543928 LHX1P48742 406 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 ARPP19P56211 112 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 EXOC3L4Q17RC7 722 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 SLC8B1Q6J4K2 584 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 PALB2Q86YC2 1186 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 OR6B3Q8NGW1 331 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 OR10T2Q8NGX3 314 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 PPM1EQ8WY54 764 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 NT5C1BQ96P26 610 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 CDCA3Q99618 268 aaPredicted RBP14.58□□□□□ -0.08
SP140-213ENST00000543928 OXCT2Q9BYC2 517 aaPredicted RBP14.58□□□□□ -0.08
SP140-213ENST00000543928 BCO2Q9BYV7 579 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 SNX25Q9H3E2 840 aa14.58□□□□□ -0.08
SP140-213ENST00000543928 OR4Q2P0C623 313 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 CPB1P15086 417 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 SLC9A1P19634 815 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 ACAT1P24752 427 aaKnown RBP14.57□□□□□ -0.08
SP140-213ENST00000543928 LMO2P25791 158 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 GNL1P36915 607 aaPredicted RBP14.57□□□□□ -0.08
SP140-213ENST00000543928 ROR1Q01973 937 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 RAB33AQ14088 237 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 FKBP15Q5T1M5 1219 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 LLGL2Q6P1M3 1020 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 TRIM65Q6PJ69 517 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 PPFIBP1Q86W92 1011 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 FAXDC2Q96IV6 333 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 TMEM209Q96SK2 561 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 ARID3AQ99856 593 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 CYP3A43Q9HB55 503 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 NME7Q9Y5B8 376 aa14.57□□□□□ -0.08
SP140-213ENST00000543928 WDR27A2RRH5 827 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 LGALS16A8MUM7 142 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 TGM5O43548 720 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 GLUD1P00367 558 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 PDGFRBP09619 1106 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 EPCAMP16422 314 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 CD58P19256 250 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 PON1P27169 355 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 PCSK1P29120 753 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 CLCN4P51793 760 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 RBM10P98175 930 aaKnown RBP14.56□□□□□ -0.08
SP140-213ENST00000543928 TSPY1Q01534 308 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 KCNMA1Q12791 1236 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 CUL2Q13617 745 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 ARHGEF19Q8IW93 802 aa14.56□□□□□ -0.08
SP140-213ENST00000543928 PPM1KQ8N3J5 372 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms