RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CFHP08603 1231 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 GTF2A1P52655 376 aaPredicted RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 CDH8P55286 799 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 HNRNPH2P55795 449 aaKnown RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 DSC3Q14574 896 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 NAA30Q147X3 362 aaPredicted RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 MRPL10Q7Z7H8 261 aaKnown RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 SLC4A11Q8NBS3 891 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 ZNF564Q8TBZ8 553 aaPredicted RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 CAGE1Q8TC20 777 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 COG1Q8WTW3 980 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 CPA5Q8WXQ8 436 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 TMEM176AQ96HP8 235 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 HES6Q96HZ4 224 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 CAPZA3Q96KX2 299 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 MMS19Q96T76 1030 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 MYCBPQ99417 103 aaPredicted RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 ZSWIM1Q9BR11 485 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 STARD7Q9NQZ5 370 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 KLK14Q9P0G3 267 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 AMFRQ9UKV5 643 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 PADI3Q9ULW8 664 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 BARX2Q9UMQ3 279 aaPredicted RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 KBTBD13C9JR72 458 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 PTGESO14684 152 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 PPEF2O14830 753 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 ATMINO43313 823 aaPredicted RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 ITGA4P13612 1032 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 LRPAP1P30533 357 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 CD52P31358 61 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 TNNT3P45378 269 aaPredicted RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 PTP4A2Q12974 167 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 NFX1Q12986 1120 aaKnown RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 ZNF394Q53GI3 561 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 LIN9Q5TKA1 542 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 PASD1Q8IV76 773 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 TMEM35BQ8NCS4 154 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 TFAP2BQ92481 460 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 PBKQ96KB5 322 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 PPP1R10Q96QC0 940 aaKnown RBP9.92□□□□□ -0.82
GNE-206ENST00000543356 NCAPGQ9BPX3 1015 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 ELOVL4Q9GZR5 314 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 LHX5Q9H2C1 402 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 GOLPH3Q9H4A6 298 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 KIAA1257Q9ULG3 409 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 GIT1Q9Y2X7 761 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 CEP83Q9Y592 693 aa9.92□□□□□ -0.82
GNE-206ENST00000543356 PDE2AO00408 941 aaPredicted RBP9.91□□□□□ -0.82
GNE-206ENST00000543356 DNM1LO00429 736 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 ZNF623O75123 536 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 GHRP10912 638 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 MMP8P22894 467 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 GYS2P54840 703 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 TEX35Q5T0J7 233 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 ZNF618Q5T7W0 954 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
GNE-206ENST00000543356 TWNKQ96RR1 684 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 RPS6KC1Q96S38 1066 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 PAK6Q9NQU5 681 aaPredicted RBP9.91□□□□□ -0.82
GNE-206ENST00000543356 SLC38A7Q9NVC3 462 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 GDAP2Q9NXN4 497 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 HMGXB4Q9UGU5 601 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 PACSIN2Q9UNF0 486 aaPredicted RBP9.91□□□□□ -0.82
GNE-206ENST00000543356 PTPN22Q9Y2R2 807 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 MIF4GDA9UHW6 222 aaKnown RBP9.91□□□□□ -0.82
GNE-206ENST00000543356 ARVCFO00192 962 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 CALB1P05937 261 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 VDRP11473 427 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 CKBP12277 381 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 SKIP12755 728 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 RRM1P23921 792 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 CXCR5P32302 372 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 PAFAH1B1P43034 410 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 SV2CQ496J9 727 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 CFAP221Q4G0U5 840 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 CCDC181Q5TID7 509 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 TRAF7Q6Q0C0 670 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 LIMS2Q7Z4I7 341 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 SH3TC2Q8TF17 1288 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 PSMB7Q99436 277 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 BEGAINQ9BUH8 593 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 ADAM22Q9P0K1 906 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 SCINQ9Y6U3 715 aa9.91□□□□□ -0.82
GNE-206ENST00000543356 FAM170AA1A519 330 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 DDX3YO15523 660 aaKnown RBP9.9□□□□□ -0.82
GNE-206ENST00000543356 CD19P15391 556 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 TAF6P49848 677 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 NDST1P52848 882 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 SOX4Q06945 474 aaPredicted RBP9.9□□□□□ -0.82
GNE-206ENST00000543356 PLEKHA7Q6IQ23 1121 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 MMS22LQ6ZRQ5 1243 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 UNC93AQ86WB7 457 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 C1orf131Q8NDD1 294 aaKnown RBP9.9□□□□□ -0.82
GNE-206ENST00000543356 C11orf70Q9BRQ4 267 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 NT5C1AQ9BXI3 368 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 OSBPL7Q9BZF2 842 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 UNC93B1Q9H1C4 597 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 TRPV6Q9H1D0 765 aa9.9□□□□□ -0.82
GNE-206ENST00000543356 MRPL47Q9HD33 250 aaKnown RBP9.9□□□□□ -0.82
GNE-206ENST00000543356 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms