RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, human

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFC5-209	ENST00000543153	DNAJB8	Q8NHS0	232 aa		11.33	□□□□□ -0.6
RFC5-209	ENST00000543153	RIN3	Q8TB24	985 aa		11.33	□□□□□ -0.6
RFC5-209	ENST00000543153	CCDC136	Q96JN2	1154 aa		11.33	□□□□□ -0.6
RFC5-209	ENST00000543153	CDCA3	Q99618	268 aa	Predicted RBP	11.33	□□□□□ -0.6
RFC5-209	ENST00000543153	APOL5	Q9BWW9	433 aa		11.33	□□□□□ -0.6
RFC5-209	ENST00000543153	PHF7	Q9BWX1	381 aa	Predicted RBP	11.33	□□□□□ -0.6
RFC5-209	ENST00000543153	SLC26A6	Q9BXS9	759 aa		11.33	□□□□□ -0.6
RFC5-209	ENST00000543153	OSBPL1A	Q9BXW6	950 aa		11.33	□□□□□ -0.6
RFC5-209	ENST00000543153	TMEM117	Q9H0C3	514 aa		11.33	□□□□□ -0.6
RFC5-209	ENST00000543153	NRBP2	Q9NSY0	501 aa		11.33	□□□□□ -0.6
RFC5-209	ENST00000543153	MYO7A	Q13402	2215 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	FAM170B	A6NMN3	283 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	GPR32	O75388	356 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	PBX3	P40426	434 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	TEC	P42680	631 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	MRE11	P49959	708 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	JAK3	P52333	1124 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	NLRP5	P59047	1200 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	RNF4	P78317	190 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	NHLH1	Q02575	133 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	BMS1	Q14692	1282 aa	Known RBP	11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	LRCH2	Q5VUJ6	765 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	LARP1B	Q659C4	914 aa	Known RBP	11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	MRPS27	Q92552	414 aa	Known RBP	11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	EDA	Q92838	391 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	TEKT3	Q9BXF9	490 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	KCNH6	Q9H252	994 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	TNKS2	Q9H2K2	1166 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	ELAC1	Q9H777	363 aa	Known RBP	11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	VPS54	Q9P1Q0	977 aa		11.32	□□□□□ -0.6
RFC5-209	ENST00000543153	TMEM221	A6NGB7	291 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153		M0R296	226 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	CPLX1	O14810	134 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	PRPF3	O43395	683 aa	Known RBP	11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	DYRK3	O43781	588 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	EOMES	O95936	686 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	F13B	P05160	661 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	PSMA5	P28066	241 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	SFN	P31947	248 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	DNM2	P50570	870 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	ERVFC1	P60507	584 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	CCT2	P78371	535 aa	Known RBP	11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	RAB33A	Q14088	237 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	CBX2	Q14781	532 aa	Predicted RBP	11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	DUSP6	Q16828	381 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	KCNT2	Q6UVM3	1135 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	ZNF765	Q7L2R6	523 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	MIER3	Q7Z3K6	550 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	SHKBP1	Q8TBC3	707 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	CRYGN	Q8WXF5	182 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	SLC6A18	Q96N87	628 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	RNF26	Q9BY78	433 aa	Predicted RBP	11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	NGRN	Q9NPE2	291 aa	Known RBP	11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	DACT1	Q9NYF0	836 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	MAPK8IP1	Q9UQF2	711 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	LZTS1	Q9Y250	596 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	PIEZO1	Q92508	2521 aa		11.31	□□□□□ -0.6
RFC5-209	ENST00000543153	KIAA1671	Q9BY89	1806 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	LOC730098	B7Z3J9	87 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	ADAMTS3	O15072	1205 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	KLF4	O43474	513 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	REC8	O95072	547 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	FGFR4	P22455	802 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	RPS6KB1	P23443	525 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	ALDH7A1	P49419	539 aa	Known RBP	11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	GPC3	P51654	580 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	PKN1	Q16512	942 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	MTERF2	Q49AM1	385 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	SFRP5	Q5T4F7	317 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	TWF2	Q6IBS0	349 aa	Known RBP	11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	ECHDC2	Q86YB7	292 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	VN1R2	Q8NFZ6	395 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	KREMEN1	Q96MU8	473 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	CASD1	Q96PB1	797 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	MRPL9	Q9BYD2	267 aa	Known RBP	11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	CWH43	Q9H720	699 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	NCOA5	Q9HCD5	579 aa	Known RBP	11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	SPG21	Q9NZD8	308 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	SUCO	Q9UBS9	1254 aa	Known RBP	11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	SNX14	Q9Y5W7	946 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	ATG2A	Q2TAZ0	1938 aa		11.3	□□□□□ -0.6
RFC5-209	ENST00000543153	HIDE1	A8MVS5	230 aa		11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	MSH4	O15457	936 aa		11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	DARS	P14868	501 aa	Known RBP	11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	ATF7	P17544	494 aa	Predicted RBP	11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	SFPQ	P23246	707 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	CIITA	P33076	1130 aa		11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	PMS1	P54277	932 aa	Known RBP	11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	ZXDA	P98168	799 aa		11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	RNASEL	Q05823	741 aa	Known RBP	11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	SSRP1	Q08945	709 aa	Known RBP	11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	SMC1A	Q14683	1233 aa	Known RBP	11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	UGCG	Q16739	394 aa		11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	LONRF3	Q496Y0	759 aa		11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	CES5A	Q6NT32	575 aa		11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	ANKRD54	Q6NXT1	300 aa		11.29	□□□□□ -0.6
RFC5-209	ENST00000543153	TBCK	Q8TEA7	893 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms