RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 KREMEN1Q96MU8 473 aa24.7■■□□□ 1.54
HOMER3-205ENST00000542541 ARID3AQ99856 593 aa24.7■■□□□ 1.54
HOMER3-205ENST00000542541 NAA15Q9BXJ9 866 aaKnown RBP24.7■■□□□ 1.54
HOMER3-205ENST00000542541 ALG13Q9NP73 1137 aaKnown RBP24.7■■□□□ 1.54
HOMER3-205ENST00000542541 CISHQ9NSE2 258 aa24.7■■□□□ 1.54
HOMER3-205ENST00000542541 H7C4K7 107 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 GABRDO14764 452 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 OAZ2O95190 189 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 URODP06132 367 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 GLUD2P49448 558 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 GPM6BQ13491 265 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 ARHGAP44Q17R89 818 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 SPRED2Q7Z698 418 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 UNC93AQ86WB7 457 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 SPPL3Q8TCT6 385 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 ARNTL2Q8WYA1 636 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 KAT5Q92993 513 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 SPAG5Q96R06 1193 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 MRPL45Q9BRJ2 306 aaKnown RBP24.69■■□□□ 1.54
HOMER3-205ENST00000542541 OXCT2Q9BYC2 517 aaPredicted RBP24.69■■□□□ 1.54
HOMER3-205ENST00000542541 SDCBP2Q9H190 292 aa24.69■■□□□ 1.54
HOMER3-205ENST00000542541 BARX2Q9UMQ3 279 aaPredicted RBP24.69■■□□□ 1.54
HOMER3-205ENST00000542541 CHD9Q3L8U1 2897 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 EPHB6O15197 1021 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 TPM1P09493 284 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 CD58P19256 250 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 CDC25BP30305 580 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 RAP1GAPP47736 663 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 DSG1Q02413 1049 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 INCA1Q0VD86 236 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 VARS2Q5ST30 1063 aaKnown RBP24.68■■□□□ 1.54
HOMER3-205ENST00000542541 PPFIBP1Q86W92 1011 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 KBTBD7Q8WVZ9 684 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 CERS4Q9HA82 394 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 NLRC4Q9NPP4 1024 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 TMEM265A0A087WTH1 108 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 A0A1W2PQJ5 194 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 PCSK1P29120 753 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 DRAP1Q14919 205 aaPredicted RBP24.68■■□□□ 1.54
HOMER3-205ENST00000542541 RTP2Q5QGT7 225 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 ZNF280DQ6N043 979 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 TMC6Q7Z403 805 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.68■■□□□ 1.54
HOMER3-205ENST00000542541 DRC7Q8IY82 874 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 ZNF397Q8NF99 534 aaPredicted RBP24.68■■□□□ 1.54
HOMER3-205ENST00000542541 POF1BQ8WVV4 589 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 RIN2Q8WYP3 895 aaPredicted RBP24.68■■□□□ 1.54
HOMER3-205ENST00000542541 PIK3R5Q8WYR1 880 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 SHC3Q92529 594 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 B3GALT6Q96L58 329 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 MRPL17Q9NRX2 175 aaKnown RBP24.68■■□□□ 1.54
HOMER3-205ENST00000542541 DDX43Q9NXZ2 648 aaKnown RBP24.68■■□□□ 1.54
HOMER3-205ENST00000542541 STXBP5LQ9Y2K9 1186 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 PCDHB4Q9Y5E5 795 aa24.68■■□□□ 1.54
HOMER3-205ENST00000542541 A8MXQ7 604 aa24.67■■□□□ 1.54
HOMER3-205ENST00000542541 CTSAP10619 480 aa24.67■■□□□ 1.54
HOMER3-205ENST00000542541 MRPL58Q14197 206 aaKnown RBP24.67■■□□□ 1.54
HOMER3-205ENST00000542541 KIAA0319Q5VV43 1072 aa24.67■■□□□ 1.54
HOMER3-205ENST00000542541 TMC7Q7Z402 723 aa24.67■■□□□ 1.54
HOMER3-205ENST00000542541 FMNL3Q8IVF7 1028 aa24.67■■□□□ 1.54
HOMER3-205ENST00000542541 TTYH3Q9C0H2 523 aa24.67■■□□□ 1.54
HOMER3-205ENST00000542541 ZBP1Q9H171 429 aa24.67■■□□□ 1.54
HOMER3-205ENST00000542541 ZNF576Q9H609 170 aa24.67■■□□□ 1.54
HOMER3-205ENST00000542541 MYO6Q9UM54 1294 aa24.67■■□□□ 1.54
HOMER3-205ENST00000542541 KIAA1671Q9BY89 1806 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 CILPO75339 1184 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 ACO1P21399 889 aaKnown RBP24.66■■□□□ 1.54
HOMER3-205ENST00000542541 CREMQ03060 361 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 CTXN3Q4LDR2 81 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 PDE12Q6L8Q7 609 aaKnown RBP24.66■■□□□ 1.54
HOMER3-205ENST00000542541 UBR7Q8N806 425 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 TNIP3Q96KP6 325 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 ACBD6Q9BR61 282 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 NT5C1AQ9BXI3 368 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 LMAN2LQ9H0V9 348 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 NUCKS1Q9H1E3 243 aaKnown RBP24.66■■□□□ 1.54
HOMER3-205ENST00000542541 NGRNQ9NPE2 291 aaKnown RBP24.66■■□□□ 1.54
HOMER3-205ENST00000542541 TLR9Q9NR96 1032 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.66■■□□□ 1.54
HOMER3-205ENST00000542541 CAPN11Q9UMQ6 739 aa24.66■■□□□ 1.54
HOMER3-205ENST00000542541 LUC7L2Q9Y383 392 aaKnown RBP24.66■■□□□ 1.54
HOMER3-205ENST00000542541 GRM6O15303 877 aa24.65■■□□□ 1.54
HOMER3-205ENST00000542541 KRT5P13647 590 aa24.65■■□□□ 1.54
HOMER3-205ENST00000542541 NDST1P52848 882 aa24.65■■□□□ 1.54
HOMER3-205ENST00000542541 TMEM270Q6UE05 265 aa24.65■■□□□ 1.54
HOMER3-205ENST00000542541 LNX1Q8TBB1 728 aaPredicted RBP24.65■■□□□ 1.54
HOMER3-205ENST00000542541 CPLX3Q8WVH0 158 aa24.65■■□□□ 1.54
HOMER3-205ENST00000542541 AJAP1Q9UKB5 411 aaPredicted RBP24.65■■□□□ 1.54
HOMER3-205ENST00000542541 CNTN6Q9UQ52 1028 aa24.65■■□□□ 1.54
HOMER3-205ENST00000542541 BACE2Q9Y5Z0 518 aa24.65■■□□□ 1.54
HOMER3-205ENST00000542541 OR6C75A6NL08 312 aa24.64■■□□□ 1.54
HOMER3-205ENST00000542541 FOXN3O00409 490 aaPredicted RBP24.64■■□□□ 1.54
HOMER3-205ENST00000542541 LPXNO60711 386 aa24.64■■□□□ 1.54
HOMER3-205ENST00000542541 USP8P40818 1118 aa24.64■■□□□ 1.54
HOMER3-205ENST00000542541 STAT1P42224 750 aa24.64■■□□□ 1.54
HOMER3-205ENST00000542541 PSMD5Q16401 504 aa24.64■■□□□ 1.54
HOMER3-205ENST00000542541 OSTM1Q86WC4 334 aa24.64■■□□□ 1.54
HOMER3-205ENST00000542541 MICAL1Q8TDZ2 1067 aa24.64■■□□□ 1.54
HOMER3-205ENST00000542541 TCF25Q9BQ70 676 aa24.64■■□□□ 1.54
HOMER3-205ENST00000542541 ENTPD7Q9NQZ7 604 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms