RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ZCWPW1Q9H0M4 648 aa17.7■□□□□ 0.42
CCND1-205ENST00000542367 ASAH2Q9NR71 780 aa17.7■□□□□ 0.42
CCND1-205ENST00000542367 ARHGEF3Q9NR81 526 aa17.7■□□□□ 0.42
CCND1-205ENST00000542367 HSPBP1Q9NZL4 362 aa17.7■□□□□ 0.42
CCND1-205ENST00000542367 PVALEFA0A1B0GWK0 134 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 TGFB1I1O43294 461 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 MOSPD3O75425 235 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 ECI2O75521 394 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 SOAT2O75908 522 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 KRT19P08727 400 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 GJA1P17302 382 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 RFX1P22670 979 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 EPHA5P54756 1037 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 LMBRD2Q68DH5 695 aaPredicted RBP17.69■□□□□ 0.42
CCND1-205ENST00000542367 NELFCDQ8IXH7 590 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 TTC9BQ8N6N2 239 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 CXorf38Q8TB03 319 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 LEO1Q8WVC0 666 aaPredicted RBP17.69■□□□□ 0.42
CCND1-205ENST00000542367 SCFD1Q8WVM8 642 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 ZSWIM3Q96MP5 696 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 MTMR12Q9C0I1 747 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 DNAJC25Q9H1X3 360 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 TBC1D17Q9HA65 648 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 SLC39A2Q9NP94 309 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 TSC2P49815 1807 aa17.69■□□□□ 0.42
CCND1-205ENST00000542367 A0A1B0GVL5 298 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 CLIC2O15247 247 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 TMEM191BP0C7N4 346 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 SLFN14P0C7P3 912 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 CMA1P23946 247 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 MRE11P49959 708 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 KRT85P78386 507 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 RBP5P82980 135 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 BFSP1Q12934 665 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 SURF1Q15526 300 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 FAM78AQ5JUQ0 283 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 LRRTM3Q86VH5 581 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 LRRC52Q8N7C0 313 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 RDH13Q8NBN7 331 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 ATOH1Q92858 354 aaPredicted RBP17.68■□□□□ 0.42
CCND1-205ENST00000542367 ELSPBP1Q96BH3 223 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 PAGE5Q96GU1 130 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 ANKRD36BP1Q96IX9 119 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 SPATA32Q96LK8 384 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 LRRC3Q9BY71 257 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 IRF2BPLQ9H1B7 796 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 KIAA1586Q9HCI6 787 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 AGPAT3Q9NRZ7 376 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 FAM86C1Q9NVL1 165 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 INTS13Q9NVM9 706 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 HSFX1Q9UBD0 423 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 SIX4Q9UIU6 781 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 UBE4BO95155 1302 aa17.68■□□□□ 0.42
CCND1-205ENST00000542367 ACTN4O43707 911 aaKnown RBP17.67■□□□□ 0.42
CCND1-205ENST00000542367 HUS1O60921 280 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 PFKFB1P16118 471 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 FCARP24071 287 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 TUFMP49411 452 aaKnown RBP17.67■□□□□ 0.42
CCND1-205ENST00000542367 SNW1Q13573 536 aaKnown RBP17.67■□□□□ 0.42
CCND1-205ENST00000542367 TEAD2Q15562 447 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 MGAT5BQ3V5L5 792 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 SLC44A4Q53GD3 710 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 PHLDB3Q6NSJ2 640 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 DNAJB7Q7Z6W7 309 aaPredicted RBP17.67■□□□□ 0.42
CCND1-205ENST00000542367 TMC8Q8IU68 726 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 PDCL2Q8N4E4 241 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 OR5B17Q8NGF7 314 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 SHKBP1Q8TBC3 707 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 ASB16Q96NS5 453 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 SEPT5Q99719 369 aaPredicted RBP17.67■□□□□ 0.42
CCND1-205ENST00000542367 ZFP14Q9HCL3 533 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 L1RE1Q9UN81 338 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 ASB3Q9Y575 518 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 PTPRJQ12913 1337 aa17.67■□□□□ 0.42
CCND1-205ENST00000542367 A0A1W2PRU2 124 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 TNNC2P02585 160 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 CYP2J2P51589 502 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 STARD6P59095 220 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 SNRPFP62306 86 aaKnown RBP17.66■□□□□ 0.42
CCND1-205ENST00000542367 PFKPQ01813 784 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 SMARCB1Q12824 385 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 SNRNP35Q16560 246 aaKnown RBP17.66■□□□□ 0.42
CCND1-205ENST00000542367 DUOXA2Q1HG44 320 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 HS2ST1Q7LGA3 356 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 CCDC105Q8IYK2 499 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 DCP1BQ8IZD4 617 aaKnown RBP17.66■□□□□ 0.42
CCND1-205ENST00000542367 FAM200AQ8TCP9 573 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 C2orf15Q8WU43 125 aaKnown RBP17.66■□□□□ 0.42
CCND1-205ENST00000542367 SMARCD2Q92925 531 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 PSMG2Q969U7 264 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 SHDQ96IW2 340 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 GPR88Q9GZN0 384 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 ZNF334Q9HCZ1 680 aaPredicted RBP17.66■□□□□ 0.42
CCND1-205ENST00000542367 GDAP2Q9NXN4 497 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 DDX43Q9NXZ2 648 aaKnown RBP17.66■□□□□ 0.42
CCND1-205ENST00000542367 SIT1Q9Y3P8 196 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 R3HCC1Q9Y3T6 440 aaKnown RBP17.66■□□□□ 0.42
CCND1-205ENST00000542367 SNX9Q9Y5X1 595 aa17.66■□□□□ 0.42
CCND1-205ENST00000542367 KLRC4O43908 158 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 343.6 ms