RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 TMEM130Q8N3G9 435 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 SYNPOQ8N3V7 929 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 TTC8Q8TAM2 541 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 FAM212AQ96EL1 285 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 SENP8Q96LD8 212 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 GTSE1Q9NYZ3 720 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 ODF2LQ9ULJ1 636 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 TCHHQ07283 1943 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 NPHP3-ACAD11A0A0J9YXS1 232 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 VWA3AA6NCI4 1184 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 TUFMP49411 452 aaKnown RBP16.73■□□□□ 0.27
RTN3-211ENST00000542238 GUCY2FP51841 1108 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 PLCB2Q00722 1185 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 DMWDQ09019 674 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 VEPH1Q14D04 833 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 PTPAQ15257 358 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 ENOX2Q16206 610 aaKnown RBP16.73■□□□□ 0.27
RTN3-211ENST00000542238 TAF12Q16514 161 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 SPATA1Q5VX52 437 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 TXNDC11Q6PKC3 985 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 PRR23CQ6ZRP0 262 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 Q6ZS52 159 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 ZFYVE19Q96K21 471 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 GCNAQ96QF7 691 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 THG1LQ9NWX6 298 aaKnown RBP16.73■□□□□ 0.27
RTN3-211ENST00000542238 TBX20Q9UMR3 447 aa16.73■□□□□ 0.27
RTN3-211ENST00000542238 KMT2BQ9UMN6 2715 aaPredicted RBP16.73■□□□□ 0.27
RTN3-211ENST00000542238 ZNF638Q14966 1978 aaKnown RBP16.73■□□□□ 0.27
RTN3-211ENST00000542238 SPAG17Q6Q759 2223 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 K7ESF4 209 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 SOAT2O75908 522 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 ADRB2P07550 413 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 ADRB1P08588 477 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 WEE1P30291 646 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 CDC25CP30307 473 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 SRSF5Q13243 272 aaKnown RBP16.72■□□□□ 0.27
RTN3-211ENST00000542238 PON2Q15165 354 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 ARSHQ5FYA8 562 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 PPM1JQ5JR12 505 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 ARL6IP4Q66PJ3 421 aaKnown RBP16.72■□□□□ 0.27
RTN3-211ENST00000542238 JADE1Q6IE81 842 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 MYCT1Q8N699 235 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 BPIFB1Q8TDL5 484 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 KCNN1Q92952 543 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 SEPT5Q99719 369 aaPredicted RBP16.72■□□□□ 0.27
RTN3-211ENST00000542238 MKNK1Q9BUB5 465 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 MSTO1Q9BUK6 570 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 TASP1Q9H6P5 420 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 DSEQ9UL01 958 aa16.72■□□□□ 0.27
RTN3-211ENST00000542238 TSC2P49815 1807 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 K7ENM7 598 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 PPEF2O14830 753 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 FAM189A1O60320 539 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 FAM13AO94988 1023 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 PIGRP01833 764 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 HOXA6P31267 233 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 ABCD1P33897 745 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 ITPRIPL2Q3MIP1 535 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 MGAT5BQ3V5L5 792 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 TMEM119Q4V9L6 283 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 SLC39A12Q504Y0 691 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 C9orf57Q5W0N0 161 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 GPBP1Q86WP2 473 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 METTL23Q86XA0 190 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 TTC9BQ8N6N2 239 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 CALML4Q96GE6 196 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 LRRC3BQ96PB8 259 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 TMEM209Q96SK2 561 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 REEP2Q9BRK0 252 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 ZMYM5Q9UJ78 669 aa16.71■□□□□ 0.27
RTN3-211ENST00000542238 CHD8Q9HCK8 2581 aa16.71■□□□□ 0.26
RTN3-211ENST00000542238 SCN1AP35498 2009 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 A0A0B4J269 797 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 SLC26A4O43511 780 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
RTN3-211ENST00000542238 MCM2P49736 904 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 CCINQ13939 588 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 DHX8Q14562 1220 aaKnown RBP16.7■□□□□ 0.26
RTN3-211ENST00000542238 TMEM132DQ14C87 1099 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 WDR5BQ86VZ2 330 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 THEM5Q8N1Q8 247 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 FAM160A2Q8N612 972 aaPredicted RBP16.7■□□□□ 0.26
RTN3-211ENST00000542238 OR10T2Q8NGX3 314 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 C2orf15Q8WU43 125 aaKnown RBP16.7■□□□□ 0.26
RTN3-211ENST00000542238 DDX1Q92499 740 aaKnown RBP16.7■□□□□ 0.26
RTN3-211ENST00000542238 AK8Q96MA6 479 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 LPIN3Q9BQK8 851 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 ZCWPW1Q9H0M4 648 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 PARVGQ9HBI0 331 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 CPSF3Q9UKF6 684 aaKnown RBP16.7■□□□□ 0.26
RTN3-211ENST00000542238 DERAQ9Y315 318 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 GREB1Q4ZG55 1949 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 DENND4CQ5VZ89 1909 aa16.7■□□□□ 0.26
RTN3-211ENST00000542238 SDK1Q7Z5N4 2213 aa16.69■□□□□ 0.26
RTN3-211ENST00000542238 MAP1BP46821 2468 aaKnown RBP16.69■□□□□ 0.26
RTN3-211ENST00000542238 PIRO00625 290 aa16.69■□□□□ 0.26
RTN3-211ENST00000542238 TRAK2O60296 914 aa16.69■□□□□ 0.26
RTN3-211ENST00000542238 PRAMEF12O95522 483 aa16.69■□□□□ 0.26
RTN3-211ENST00000542238 CYP11A1P05108 521 aa16.69■□□□□ 0.26
RTN3-211ENST00000542238 NFICP08651 508 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms