RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 SLF1Q9BQI6 1058 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 KRT23Q9C075 422 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 SPATC1LQ9H0A9 340 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 ZNF552Q9H707 407 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-220ENST00000541963 C14orf119Q9NWQ9 140 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 BTBD7Q9P203 1132 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 ISY1Q9ULR0 285 aaKnown RBP6.23□□□□□ -1.41
CPSF7-220ENST00000541963 ADAMTS5Q9UNA0 930 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.23□□□□□ -1.41
CPSF7-220ENST00000541963 ASB1Q9Y576 335 aa6.23□□□□□ -1.41
CPSF7-220ENST00000541963 PLIN4Q96Q06 1357 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 E2F8A0AVK6 867 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 UBA6A0AVT1 1052 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 ACOT7O00154 380 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 VWA5AO00534 786 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 KDM1AO60341 852 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 PLA2G6O60733 806 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 EIF5BO60841 1220 aaKnown RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 CNMDO75829 334 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 SNUPNO95149 360 aaKnown RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 SGPL1O95470 568 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 TFRCP02786 760 aaKnown RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 MMEP08473 750 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 TOP1P11387 765 aaKnown RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 FCER1AP12319 257 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 GSPT1P15170 499 aaKnown RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 PFKLP17858 780 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 EN2P19622 333 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 CHMLP26374 656 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 VIPR1P32241 457 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 OAZ1P54368 228 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 SCAND1P57086 179 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 HAND2P61296 217 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 ZNF200P98182 395 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 DBPQ10586 325 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 IKQ13123 557 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 KCTD2Q14681 263 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 KIAA1755Q5JYT7 1200 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 TTC38Q5R3I4 469 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 CATSPEREQ5SY80 951 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 MFSD14CQ5VZR4 134 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 VASNQ6EMK4 673 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 FSTL4Q6MZW2 842 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 MIB1Q86YT6 1006 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 ABRAQ8N0Z2 381 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 CALML6Q8TD86 181 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 ASB15Q8WXK1 588 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 C16orf92Q96LL3 132 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 ACAP3Q96P50 834 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 MOV10L1Q9BXT6 1211 aaKnown RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 TRIM8Q9BZR9 551 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 PORCNQ9H237 461 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 ZMAT4Q9H898 229 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 INCENPQ9NQS7 918 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 TOPORSQ9NS56 1045 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-220ENST00000541963 MKS1Q9NXB0 559 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 MSRAQ9UJ68 235 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 PNMA2Q9UL42 364 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 FAN1Q9Y2M0 1017 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 HCFC2Q9Y5Z7 792 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 RPTORQ8N122 1335 aa6.22□□□□□ -1.41
CPSF7-220ENST00000541963 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.21□□□□□ -1.42
CPSF7-220ENST00000541963 TMEM232C9JQI7 657 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 GOLGA6L22H0YM25 854 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 GABRDO14764 452 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 PEX10O60683 326 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 HOXC6P09630 235 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 MCCP23508 829 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 STAT5AP42229 794 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 NOVP48745 357 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 IRAK1P51617 712 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 STAT2P52630 851 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 ROM1Q03395 351 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 GRB14Q14449 540 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 CLUL1Q15846 466 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 TEPPQ6URK8 271 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 DGKHQ86XP1 1220 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 CPXCR1Q8N123 301 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 USP6NLQ92738 828 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 FERMT2Q96AC1 680 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 TEX13BQ9BXU2 312 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 RNF38Q9H0F5 515 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 EPB41L4BQ9H329 900 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 BCAS3Q9H6U6 928 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 VTA1Q9NP79 307 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 IL17RBQ9NRM6 502 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 HSPBP1Q9NZL4 362 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 FBXO40Q9UH90 709 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 MYH4Q9Y623 1939 aa6.21□□□□□ -1.42
CPSF7-220ENST00000541963 ZSWIM8A7E2V4 1837 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 DOCK3Q8IZD9 2030 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 ERICH2A1L162 156 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 ATP2A1O14983 1001 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 APOL3O95236 402 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 PARNO95453 639 aaKnown RBP6.2□□□□□ -1.42
CPSF7-220ENST00000541963 LRG1P02750 347 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 ASGR2P07307 311 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 PTGS1P23219 599 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 ADORA2AP29274 412 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 CACNB2Q08289 660 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms