RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 MCPH1Q8NEM0 835 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 DHX33Q9H6R0 707 aaKnown RBP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 KCNK9Q9NPC2 374 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 RNF146Q9NTX7 359 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 BAIAP2L1Q9UHR4 511 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 CHKBQ9Y259 395 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 hCG_1818297A0A087WSY0 165 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 TLR3O15455 904 aaKnown RBP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 ATG7O95352 703 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 CCND2P30279 289 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 SKIV2L2P42285 1042 aaKnown RBP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 PIK3CAP42336 1068 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 FSTL1Q12841 308 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 PKN2Q16513 984 aaKnown RBP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 EAPPQ56P03 285 aaPredicted RBP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 TMEM270Q6UE05 265 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 RIBC1Q8N443 379 aaPredicted RBP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 CGRRF1Q99675 332 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 DHRS4Q9BTZ2 278 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 AGO2Q9UKV8 859 aaKnown RBP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 SPATA31C2B4DYI2 1134 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 F8VP50 259 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 IRF6O14896 467 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 BPIFB4P59827 614 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 EMC2Q15006 297 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 SLC1A5Q15758 541 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 NKD2Q969F2 451 aaPredicted RBP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 TBC1D31Q96DN5 1066 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 ZNF570Q96NI8 536 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 FOXP3Q9BZS1 431 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 SLCO1B3Q9NPD5 702 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 KANSL3Q9P2N6 904 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 SEPT9Q9UHD8 586 aaPredicted RBP10.09□□□□□ -0.79
CNOT4-212ENST00000541284 STARD13Q9Y3M8 1113 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 PPP2R3BQ9Y5P8 575 aa10.09□□□□□ -0.79
CNOT4-212ENST00000541284 FAM47DPA6NHR8 397 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 ABLIM1O14639 778 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 BANF1O75531 89 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 CST3P01034 146 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 CDKN2BP42772 138 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 PSMC4P43686 418 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 RASA2Q15283 850 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 TMED2Q15363 201 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 TAZQ16635 292 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 SPOCD1Q6ZMY3 1216 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 GPATCH11Q8N954 259 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 SLC35B2Q8TB61 432 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 C10orf82Q8WW14 230 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 ZNF606Q8WXB4 792 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 ATP6V0A1Q93050 837 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 TMEM143Q96AN5 459 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 MYLK2Q9H1R3 596 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 PORCNQ9H237 461 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 JPH1Q9HDC5 661 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 ZMYND8Q9ULU4 1186 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 MAFBQ9Y5Q3 323 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 IGKV6D-21A0A0A0MT36 114 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 ALOX15BO15296 676 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 MAFGO15525 162 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 UNC5CO95185 931 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 CDH5P33151 784 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 NOP14P78316 857 aaKnown RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 MSS51Q4VC12 460 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 LRRC38Q5VT99 294 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 CYP4F22Q6NT55 531 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 PNMA8AQ86V59 439 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 GBP7Q8N8V2 638 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 BBOF1Q8ND07 529 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 DYDC1Q8WWB3 177 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 ACSF2Q96CM8 615 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 PCYT2Q99447 389 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 SAYSD1Q9NPB0 183 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 DRG1Q9Y295 367 aaKnown RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 C15orf41Q9Y2V0 281 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 AFG3L2Q9Y4W6 797 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 PCDHB4Q9Y5E5 795 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 FRMPD3Q5JV73 1810 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 A0A1W2PPM1 405 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 RASA4BC9J798 803 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 RASA4O43374 803 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 SPAG7O75391 227 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 PSAPP07602 524 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 SUPT20HL2P0C7V6 817 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 GM2AP17900 193 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 RPA3P35244 121 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 YARSP54577 528 aaKnown RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 STRN3Q13033 797 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 SUPT20HL1Q3ZLR7 823 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 SEZ6Q53EL9 994 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 CIAPIN1Q6FI81 312 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 ARHGEF18Q6ZSZ5 1173 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 USP37Q86T82 979 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 KIAA0319LQ8IZA0 1049 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 NIPA2Q8N8Q9 360 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 N4BP2L2Q92802 583 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms