RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 CALCAP01258 141 aa10□□□□□ -0.81
DDX55-208ENST00000541259 CD58P19256 250 aa10□□□□□ -0.81
DDX55-208ENST00000541259 ACO1P21399 889 aaKnown RBP10□□□□□ -0.81
DDX55-208ENST00000541259 BMP8BP34820 402 aa10□□□□□ -0.81
DDX55-208ENST00000541259 PNPLA4P41247 253 aa10□□□□□ -0.81
DDX55-208ENST00000541259 ALDH7A1P49419 539 aaKnown RBP10□□□□□ -0.81
DDX55-208ENST00000541259 AARSP49588 968 aaKnown RBP eCLIP10□□□□□ -0.81
DDX55-208ENST00000541259 MFAP3P55082 362 aa10□□□□□ -0.81
DDX55-208ENST00000541259 ADKP55263 362 aaKnown RBP10□□□□□ -0.81
DDX55-208ENST00000541259 JAM2P57087 298 aa10□□□□□ -0.81
DDX55-208ENST00000541259 TNNC1P63316 161 aa10□□□□□ -0.81
DDX55-208ENST00000541259 GCNT1Q02742 428 aa10□□□□□ -0.81
DDX55-208ENST00000541259 MLLT1Q03111 559 aaPredicted RBP10□□□□□ -0.81
DDX55-208ENST00000541259 RAPGEF1Q13905 1077 aa10□□□□□ -0.81
DDX55-208ENST00000541259 ARID5BQ14865 1188 aa10□□□□□ -0.81
DDX55-208ENST00000541259 DRAP1Q14919 205 aaPredicted RBP10□□□□□ -0.81
DDX55-208ENST00000541259 SOWAHAQ2M3V2 549 aa10□□□□□ -0.81
DDX55-208ENST00000541259 FIGNQ5HY92 759 aa10□□□□□ -0.81
DDX55-208ENST00000541259 DSTYKQ6XUX3 929 aa10□□□□□ -0.81
DDX55-208ENST00000541259 TAS1R1Q7RTX1 841 aa10□□□□□ -0.81
DDX55-208ENST00000541259 LIMS2Q7Z4I7 341 aa10□□□□□ -0.81
DDX55-208ENST00000541259 PPFIBP1Q86W92 1011 aa10□□□□□ -0.81
DDX55-208ENST00000541259 SLC39A11Q8N1S5 342 aa10□□□□□ -0.81
DDX55-208ENST00000541259 UBR7Q8N806 425 aa10□□□□□ -0.81
DDX55-208ENST00000541259 RSPH1Q8WYR4 309 aa10□□□□□ -0.81
DDX55-208ENST00000541259 PDLIM2Q96JY6 352 aa10□□□□□ -0.81
DDX55-208ENST00000541259 B3GALT6Q96L58 329 aa10□□□□□ -0.81
DDX55-208ENST00000541259 ZNF558Q96NG5 402 aa10□□□□□ -0.81
DDX55-208ENST00000541259 MMS19Q96T76 1030 aa10□□□□□ -0.81
DDX55-208ENST00000541259 MRPL45Q9BRJ2 306 aaKnown RBP10□□□□□ -0.81
DDX55-208ENST00000541259 NUP58Q9BVL2 599 aa10□□□□□ -0.81
DDX55-208ENST00000541259 VN1R3Q9BXE9 311 aa10□□□□□ -0.81
DDX55-208ENST00000541259 STK33Q9BYT3 514 aa10□□□□□ -0.81
DDX55-208ENST00000541259 BCO2Q9BYV7 579 aa10□□□□□ -0.81
DDX55-208ENST00000541259 GPR62Q9BZJ7 368 aa10□□□□□ -0.81
DDX55-208ENST00000541259 GDAP2Q9NXN4 497 aa10□□□□□ -0.81
DDX55-208ENST00000541259 CEP72Q9P209 647 aa10□□□□□ -0.81
DDX55-208ENST00000541259 CAPN11Q9UMQ6 739 aa10□□□□□ -0.81
DDX55-208ENST00000541259 L1RE1Q9UN81 338 aa10□□□□□ -0.81
DDX55-208ENST00000541259 YBX2Q9Y2T7 364 aaKnown RBP10□□□□□ -0.81
DDX55-208ENST00000541259 NME7Q9Y5B8 376 aa10□□□□□ -0.81
DDX55-208ENST00000541259 GTF3C5Q9Y5Q8 519 aaPredicted RBP10□□□□□ -0.81
DDX55-208ENST00000541259 A0A1W2PQJ5 194 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 LINC01553A4QN01 128 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 RCCD1A6NED2 376 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 M0QZQ0 153 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 LAG3P18627 525 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 DNAJB2P25686 324 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 ORC1Q13415 861 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 WSCD1Q658N2 575 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 E4F1Q66K89 784 aaPredicted RBP9.99□□□□□ -0.81
DDX55-208ENST00000541259 PDXDC1Q6P996 788 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 CACNA2D4Q7Z3S7 1137 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 OSTM1Q86WC4 334 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 PARP9Q8IXQ6 854 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 PDCL2Q8N4E4 241 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 TC2NQ8N9U0 490 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 WHAMMQ8TF30 809 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 KBTBD7Q8WVZ9 684 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 CLP1Q92989 425 aaKnown RBP9.99□□□□□ -0.81
DDX55-208ENST00000541259 IGSF21Q96ID5 467 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 TWNKQ96RR1 684 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 EDEM3Q9BZQ6 932 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 PRO3102Q9H379 93 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 KDM4CQ9H3R0 1056 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 CISHQ9NSE2 258 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 HMGXB4Q9UGU5 601 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 FBXL5Q9UKA1 691 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 ADAM28Q9UKQ2 775 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 LUC7L2Q9Y383 392 aaKnown RBP9.99□□□□□ -0.81
DDX55-208ENST00000541259 PCDHB4Q9Y5E5 795 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 PTPRDP23468 1912 aa9.99□□□□□ -0.81
DDX55-208ENST00000541259 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.98□□□□□ -0.81
DDX55-208ENST00000541259 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.98□□□□□ -0.81
DDX55-208ENST00000541259 LRRC53A6NM62 1247 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 F8VZ95 297 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 HUS1O60921 280 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 MFAP3LO75121 409 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 GFPT2O94808 682 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 EFEMP2O95967 443 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 CA3P07451 260 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 P4HA1P13674 534 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 TBXAS1P24557 533 aaPredicted RBP9.98□□□□□ -0.81
DDX55-208ENST00000541259 LMO2P25791 158 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 TKTP29401 623 aaKnown RBP9.98□□□□□ -0.81
DDX55-208ENST00000541259 KRT9P35527 623 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 USP8P40818 1118 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 ZBED6P86452 979 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 TRIM14Q14142 442 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 ZNF394Q53GI3 561 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 FAM171A1Q5VUB5 890 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 FUT10Q6P4F1 479 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 CCDC186Q7Z3E2 898 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 TDHQ8IZJ6 230 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 TOP6BLQ8N6T0 577 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 APPL2Q8NEU8 664 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 SHC3Q92529 594 aa9.98□□□□□ -0.81
DDX55-208ENST00000541259 ANP32BQ92688 251 aaKnown RBP9.98□□□□□ -0.81
DDX55-208ENST00000541259 PHOX2BQ99453 314 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms