RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ZWILCHQ9H900 591 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 TXLNGQ9NUQ3 528 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 CYP39A1Q9NYL5 469 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 GABBR1Q9UBS5 961 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZFP69BQ9UJL9 534 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 FZD1Q9UP38 647 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 USH1CQ9Y6N9 552 aa10.94□□□□□ -0.66
CDC42SE1-207ENST00000540998 FAM155BO75949 473 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 CD48P09326 243 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 CALB2P22676 271 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 GLRA2P23416 452 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 GCLCP48506 637 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 CTCFP49711 727 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 NOMO3P69849 1222 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 BLMHQ13867 455 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 MAP4K3Q8IVH8 894 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 SEPT12Q8IYM1 358 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 TCP10LQ8TDR4 215 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF483Q8TF39 744 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 STK32AQ8WU08 396 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 CCDC77Q9BR77 488 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 TRIM56Q9BRZ2 755 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 COQ4Q9Y3A0 265 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 NUB1Q9Y5A7 615 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 MAPK13O15264 365 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 BRD2P25440 801 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 PSMC5P62195 406 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 MTMR2Q13614 643 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 BRDTQ58F21 947 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 C12orf56Q8IXR9 622 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 SYTL5Q8TDW5 730 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 WDR60Q8WVS4 1066 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 NRG4Q8WWG1 115 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 TMX4Q9H1E5 349 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 LRRC37AA6NMS7 1700 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 E5RJQ4 531 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 DNALI1O14645 258 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 CAP2P40123 477 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 YARSP54577 528 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 NR1H3Q13133 447 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 MYBPC2Q14324 1141 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 KPNB1Q14974 876 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 TAF5Q15542 800 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 PDK4Q16654 411 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 RHPN2Q8IUC4 686 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 IGDCC3Q8IVU1 814 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 CHURC1Q8WUH1 139 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 SLITRK1Q96PX8 696 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 CADM1Q9BY67 442 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 STARD13Q9Y3M8 1113 aa10.93□□□□□ -0.66
CDC42SE1-207ENST00000540998 PIK3R2O00459 728 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 TYROBPO43914 113 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 PEX10O60683 326 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 AVILO75366 819 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 MAPTP10636 758 aaKnown RBP10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 ACO1P21399 889 aaKnown RBP10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 SERPINB3P29508 390 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 CENPCQ03188 943 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 BBS9Q3SYG4 887 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 MTERF2Q49AM1 385 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 RNF220Q5VTB9 566 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 SWSAP1Q6NVH7 229 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 CLNKQ7Z7G1 428 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 GPD1LQ8N335 351 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 RBBP8NLQ8NC74 664 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZNF526Q8TF50 670 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 MFSD14AQ96MC6 490 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 CFAP57Q96MR6 1250 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 MECRQ9BV79 373 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 XPNPEP1Q9NQW7 623 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 GINM1Q9NU53 330 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 ZFATQ9P243 1243 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 HEY2Q9UBP5 337 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 SEPT9Q9UHD8 586 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 RIPK3Q9Y572 518 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 PCDHB2Q9Y5E7 798 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 WASF2Q9Y6W5 498 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 LY75O60449 1722 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 CCDC195A0A1B0GUA6 201 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 TCEA3O75764 348 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 CYP1A1P04798 512 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 RFC5P40937 340 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 RCN1Q15293 331 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 RAB6CQ53S08 254 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 EMC1Q8N766 993 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 TTC17Q96AE7 1141 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 CLPTM1LQ96KA5 538 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 RAB3IPQ96QF0 476 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 FNBP1Q96RU3 617 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 RMDN3Q96TC7 470 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 DDX50Q9BQ39 737 aaKnown RBP10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 RAB6CQ9H0N0 254 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 NMRK1Q9NWW6 199 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 MARCOQ9UEW3 520 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 CHMP2BQ9UQN3 213 aa10.92□□□□□ -0.66
CDC42SE1-207ENST00000540998 TMEM63AO94886 807 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 TOP3BO95985 862 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 ATP4AP20648 1035 aa10.91□□□□□ -0.66
CDC42SE1-207ENST00000540998 HSD17B4P51659 736 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms