RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 MIS12Q9H081 205 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 METTL5Q9NRN9 209 aaKnown RBP18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 MSCO60682 206 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 FAM102AQ5T9C2 384 aaPredicted RBP18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 ARMCX2Q7L311 632 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 ARMC9Q7Z3E5 817 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 CCDC13Q8IYE1 715 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 CACNA2D3Q8IZS8 1091 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.07■□□□□ 0.484e-7■■■■■ 58.1
EPB41L3-204ENST00000540638 DCLK3Q9C098 648 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 IP6K2Q9UHH9 426 aa18.07■□□□□ 0.48
EPB41L3-204ENST00000540638 POLR2AP24928 1970 aaKnown RBP18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 H0YGN5 161 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 RIPK2O43353 540 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 STAG3L1P0CL83 205 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 MYBL1P10243 752 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 CENPCQ03188 943 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 QPCTQ16769 361 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 MPZL3Q6UWV2 235 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 MON1BQ7L1V2 547 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 KCTD6Q8NC69 237 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 MAIP1Q8WWC4 291 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 NFS1Q9Y697 457 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 PPFIA2O75334 1257 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 SPAG7O75391 227 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 BANF1O75531 89 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 ACO1P21399 889 aaKnown RBP18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 RFC1P35251 1148 aaPredicted RBP18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 SKOR1P84550 965 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 GKAP1Q5VSY0 366 aaPredicted RBP18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 MAK16Q9BXY0 300 aaKnown RBP18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 PCYOX1Q9UHG3 505 aa18.06■□□□□ 0.48
EPB41L3-204ENST00000540638 LACTBL1A8MY62 500 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 ATP2A1O14983 1001 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 SLC1A1P43005 524 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 BASP1P80723 227 aaKnown RBP18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 JADE1Q6IE81 842 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 GLIS1Q8NBF1 620 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 RSAD2Q8WXG1 361 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 KIF12Q96FN5 646 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 RBM15Q96T37 977 aaKnown RBP eCLIP18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 CDT1Q9H211 546 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 ERAP1Q9NZ08 941 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 HMGXB4Q9UGU5 601 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 RNF8O76064 485 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 ASS1P00966 412 aaKnown RBP18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 SEPT7Q16181 437 aaKnown RBP18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 C6orf118Q5T5N4 469 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 ZNF677Q86XU0 584 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 WDR49Q8IV35 697 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 CD101Q93033 1021 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 SPON1Q9HCB6 807 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 GPR25O00155 361 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 CALB1P05937 261 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 TGFB3P10600 412 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 EPHX2P34913 555 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 PHKA2P46019 1235 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 FNTAP49354 379 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 NRLP54845 237 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 BYSLQ13895 437 aaKnown RBP18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 PPP6R3Q5H9R7 873 aaPredicted RBP18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 PRAMEF19Q5SWL8 479 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 TRIM72Q6ZMU5 477 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 JOSD2Q8TAC2 188 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 DDX27Q96GQ7 796 aaKnown RBP18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 RUNDC3BQ96NL0 473 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 CCDC77Q9BR77 488 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 ADPGKQ9BRR6 497 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 NIFKQ9BYG3 293 aaKnown RBP18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 SNX9Q9Y5X1 595 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 CNTNAP2Q9UHC6 1331 aa18.05■□□□□ 0.48
EPB41L3-204ENST00000540638 CST8O60676 142 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 SHOX2O60902 331 aaPredicted RBP18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 ADORA2AP29274 412 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 ICAM3P32942 547 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 FAM47EQ6ZV65 393 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 CD302Q8IX05 232 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 ZBED8Q8IZ13 594 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 C2orf40Q9H1Z8 148 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 KLK14Q9P0G3 267 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 SAMD15Q9P1V8 674 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 HEY1Q9Y5J3 304 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 TJP3O95049 919 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 TAOK1Q7L7X3 1001 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 ANKS1BQ7Z6G8 1248 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 KIAA0319LQ8IZA0 1049 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 PPP2R3BQ9Y5P8 575 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 EXOC1LA0A1B0GW35 172 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 HBP1O60381 514 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 SLC25A27O95847 323 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 ABCD1P33897 745 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 BBS9Q3SYG4 887 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 ZPBP2Q6X784 338 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 C12orf29Q8N999 325 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 SETD4Q9NVD3 440 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 GPATCH2LQ9NWQ4 482 aa18.04■□□□□ 0.48
EPB41L3-204ENST00000540638 FSCN2O14926 492 aa18.03■□□□□ 0.48
EPB41L3-204ENST00000540638 DYNC1LI2O43237 492 aaPredicted RBP18.03■□□□□ 0.48
EPB41L3-204ENST00000540638 PDGFRBP09619 1106 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms