RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 CCDC89Q8N998 374 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 RNF149Q8NC42 400 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 JOSD2Q8TAC2 188 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 FEZF2Q8TBJ5 459 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 TRIM56Q9BRZ2 755 aaKnown RBP14.91□□□□□ -0.02
INO80E-203ENST00000540562 INO80BQ9C086 356 aaPredicted RBP14.91□□□□□ -0.02
INO80E-203ENST00000540562 KIAA1683Q9H0B3 1180 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 TRABDQ9H4I3 376 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 CXorf56Q9H5V9 222 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 KLHL14Q9P2G3 628 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 AVILO75366 819 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 MTA2O94776 668 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 POTEJP0CG39 1038 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 CLNS1AP54105 237 aaKnown RBP14.91□□□□□ -0.02
INO80E-203ENST00000540562 CENPCQ03188 943 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 XRCC4Q13426 336 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 SLC1A5Q15758 541 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 EAPPQ56P03 285 aaPredicted RBP14.91□□□□□ -0.02
INO80E-203ENST00000540562 SH3PXD2AQ5TCZ1 1133 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 ARMC9Q7Z3E5 817 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 MCPH1Q8NEM0 835 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 TMC2Q8TDI7 906 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 GRK7Q8WTQ7 553 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 PRPF31Q8WWY3 499 aaKnown RBP14.91□□□□□ -0.02
INO80E-203ENST00000540562 NCAPGQ9BPX3 1015 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 NPHS2Q9NP85 383 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 GINM1Q9NU53 330 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 LAMA3Q16787 3333 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 STBD1O95210 358 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 RFC1P35251 1148 aaPredicted RBP14.91□□□□□ -0.02
INO80E-203ENST00000540562 TRPC3Q13507 836 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 MSS51Q4VC12 460 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 NPNTQ6UXI9 565 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 ERICH1Q86X53 443 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 NCAPG2Q86XI2 1143 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 NSMCE1Q8WV22 266 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 LPAR1Q92633 364 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 SERPINB12Q96P63 405 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 KIAA1586Q9HCI6 787 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 CYP39A1Q9NYL5 469 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 ARHGAP28Q9P2N2 729 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 NR2E3Q9Y5X4 410 aa14.91□□□□□ -0.02
INO80E-203ENST00000540562 RBBP6Q7Z6E9 1792 aaKnown RBP14.9□□□□□ -0.02
INO80E-203ENST00000540562 KRT4P19013 534 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 PSMA2P25787 234 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 BACE1P56817 501 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 MMRN1Q13201 1228 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 KLF1Q13351 362 aaPredicted RBP14.9□□□□□ -0.02
INO80E-203ENST00000540562 SEPT7Q16181 437 aaKnown RBP14.9□□□□□ -0.02
INO80E-203ENST00000540562 GJC2Q5T442 439 aaPredicted RBP14.9□□□□□ -0.02
INO80E-203ENST00000540562 RTKN2Q8IZC4 609 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 FBXL18Q96ME1 805 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 MYCBPQ99417 103 aaPredicted RBP14.9□□□□□ -0.02
INO80E-203ENST00000540562 SENP7Q9BQF6 1050 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 CISHQ9NSE2 258 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 SLC12A4Q9UP95 1085 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 CHMP2BQ9UQN3 213 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 ATXN2Q99700 1313 aaKnown RBP14.9□□□□□ -0.02
INO80E-203ENST00000540562 CST8O60676 142 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 CDH16O75309 829 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 FGFR1P11362 822 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 CAPSQ13938 189 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 SAMD3Q8N6K7 520 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 FAM71DQ8N9W8 422 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 UBA3Q8TBC4 463 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 ACTL9Q8TC94 416 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 CENPTQ96BT3 561 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 SLITRK1Q96PX8 696 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 CCDC77Q9BR77 488 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 MYLK2Q9H1R3 596 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 PIH1D1Q9NWS0 290 aaKnown RBP14.9□□□□□ -0.02
INO80E-203ENST00000540562 HMGXB4Q9UGU5 601 aa14.9□□□□□ -0.02
INO80E-203ENST00000540562 ZNF214Q9UL59 606 aaPredicted RBP14.9□□□□□ -0.02
INO80E-203ENST00000540562 LYPLA2O95372 231 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 NQO1P15559 274 aaKnown RBP14.89□□□□□ -0.03
INO80E-203ENST00000540562 CLUL1Q15846 466 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 WDR72Q3MJ13 1102 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 DENND1BQ6P3S1 775 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 FAM83AQ86UY5 434 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 KCTD17Q8N5Z5 321 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 CKAP2Q8WWK9 683 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 ASCC2Q9H1I8 757 aaPredicted RBP14.89□□□□□ -0.03
INO80E-203ENST00000540562 A0A0G2JND7 137 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 LIASO43766 372 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 ANP32DO95626 131 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 CYP1A1P04798 512 aaPredicted RBP14.89□□□□□ -0.03
INO80E-203ENST00000540562 TAC1P20366 129 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 ADRA1DP25100 572 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 IRX4P78413 519 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 LACTBP83111 547 aaPredicted RBP14.89□□□□□ -0.03
INO80E-203ENST00000540562 OTUD4Q01804 1114 aaKnown RBP14.89□□□□□ -0.03
INO80E-203ENST00000540562 MDH1BQ5I0G3 518 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 HHATQ5VTY9 493 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 ABHD15Q6UXT9 468 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 C12orf50Q8NA57 414 aaPredicted RBP14.89□□□□□ -0.03
INO80E-203ENST00000540562 ZNF280CQ8ND82 737 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 COPS5Q92905 334 aa14.89□□□□□ -0.03
INO80E-203ENST00000540562 MAK16Q9BXY0 300 aaKnown RBP14.89□□□□□ -0.03
INO80E-203ENST00000540562 MRPL47Q9HD33 250 aaKnown RBP14.89□□□□□ -0.03
INO80E-203ENST00000540562 GPATCH2LQ9NWQ4 482 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms