RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 RXFP1Q9HBX9 757 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 EXOC1Q9NV70 894 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 ZSCAN32Q9NX65 697 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 EXOC7Q9UPT5 735 aa12.35□□□□□ -0.43
TMEM258-205ENST00000540434 CNOT1A5YKK6 2376 aaKnown RBP12.34□□□□□ -0.43
TMEM258-205ENST00000540434 GCN1Q92616 2671 aaKnown RBP12.34□□□□□ -0.43
TMEM258-205ENST00000540434 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 ANO9A1A5B4 782 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 GOLGA6L4A6NEF3 574 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 SOBPA7XYQ1 873 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 PIRO00625 290 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 FGFR3P22607 806 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 LRPAP1P30533 357 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 ABCD1P33897 745 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 GLUD2P49448 558 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 CASP4P49662 377 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 CYP2J2P51589 502 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 PSMD2Q13200 908 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 UBXN2BQ14CS0 331 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 ARMCX5Q6P1M9 558 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 CYP26C1Q6V0L0 522 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 CLEC17AQ6ZS10 378 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 CEP57Q86XR8 500 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 BRSK2Q8IWQ3 736 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 GPD1LQ8N335 351 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 OR5B17Q8NGF7 314 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 ZNF516Q92618 1163 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 TIGD1Q96MW7 591 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 DDX23Q9BUQ8 820 aaKnown RBP12.34□□□□□ -0.43
TMEM258-205ENST00000540434 BCO2Q9BYV7 579 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 MRPL17Q9NRX2 175 aaKnown RBP12.34□□□□□ -0.43
TMEM258-205ENST00000540434 DMAC2Q9NW81 257 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 TIMM13Q9Y5L4 95 aaPredicted RBP12.34□□□□□ -0.43
TMEM258-205ENST00000540434 CLUHO75153 1309 aa12.34□□□□□ -0.43
TMEM258-205ENST00000540434 KANSL1LA0AUZ9 987 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 TULP1O00294 542 aaPredicted RBP12.33□□□□□ -0.44
TMEM258-205ENST00000540434 TBC1D4O60343 1298 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 MYL1P05976 194 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 LAMP2P13473 410 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 CD44P16070 742 aaKnown RBP12.33□□□□□ -0.44
TMEM258-205ENST00000540434 CYP3A5P20815 502 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 RPL9P32969 192 aaKnown RBP12.33□□□□□ -0.44
TMEM258-205ENST00000540434 GPC5P78333 572 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 HTR4Q13639 388 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 KCNB1Q14721 858 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 TMEM132DQ14C87 1099 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 C9orf57Q5W0N0 161 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 LILRA6Q6PI73 481 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 PALB2Q86YC2 1186 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 ELMO3Q96BJ8 720 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 ZNF707Q96C28 371 aaPredicted RBP12.33□□□□□ -0.44
TMEM258-205ENST00000540434 DDX27Q96GQ7 796 aaKnown RBP12.33□□□□□ -0.44
TMEM258-205ENST00000540434 UROC1Q96N76 676 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 TTPALQ9BTX7 342 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 EMILIN2Q9BXX0 1053 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 ASB7Q9H672 318 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 MAN1C1Q9NR34 630 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 LMBRD1Q9NUN5 540 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 SLC38A7Q9NVC3 462 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 DPP3Q9NY33 737 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 RBAKQ9NYW8 714 aaPredicted RBP12.33□□□□□ -0.44
TMEM258-205ENST00000540434 SIX4Q9UIU6 781 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 UBQLN1Q9UMX0 589 aaKnown RBP12.33□□□□□ -0.44
TMEM258-205ENST00000540434 NUMBLQ9Y6R0 609 aa12.33□□□□□ -0.44
TMEM258-205ENST00000540434 CARNS1A5YM72 827 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 FAM170BA6NMN3 283 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 RFPL2O75678 378 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 URODP06132 367 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 PRCPP42785 496 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 AARSP49588 968 aaKnown RBP eCLIP12.32□□□□□ -0.44
TMEM258-205ENST00000540434 CDR1P51861 262 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
TMEM258-205ENST00000540434 LILRA4P59901 499 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 SHC2P98077 582 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 MRPL58Q14197 206 aaKnown RBP12.32□□□□□ -0.44
TMEM258-205ENST00000540434 KYAT1Q16773 422 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 C1orf220Q5T0J3 134 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 PRR23CQ6ZRP0 262 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 C12orf56Q8IXR9 622 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 C1orf127Q8N9H9 656 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 PIK3R5Q8WYR1 880 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 EEF2KMTQ96G04 330 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 SUSD3Q96L08 255 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 SEMA4GQ9NTN9 838 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 MAN1B1Q9UKM7 699 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 IGF2RP11717 2491 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 SF3B1O75533 1304 aaKnown RBP eCLIP12.32□□□□□ -0.44
TMEM258-205ENST00000540434 UBE4BO95155 1302 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 SMG1Q96Q15 3661 aaKnown RBP12.32□□□□□ -0.44
TMEM258-205ENST00000540434 NOTCH4Q99466 2003 aa12.32□□□□□ -0.44
TMEM258-205ENST00000540434 M0QZQ0 153 aa12.31□□□□□ -0.44
TMEM258-205ENST00000540434 TGM5O43548 720 aa12.31□□□□□ -0.44
TMEM258-205ENST00000540434 LDHAP00338 332 aaKnown RBP12.31□□□□□ -0.44
TMEM258-205ENST00000540434 CST3P01034 146 aaPredicted RBP12.31□□□□□ -0.44
TMEM258-205ENST00000540434 SPINK2P20155 84 aa12.31□□□□□ -0.44
TMEM258-205ENST00000540434 UBE2HP62256 183 aa12.31□□□□□ -0.44
TMEM258-205ENST00000540434 DLG4P78352 724 aa12.31□□□□□ -0.44
TMEM258-205ENST00000540434 TFAMQ00059 246 aaKnown RBP12.31□□□□□ -0.44
TMEM258-205ENST00000540434 POU5F1Q01860 360 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms