RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 MYH15Q9Y2K3 1946 aa6.99□□□□□ -1.29
SNHG1-212ENST00000539975 LTBP2Q14767 1821 aa6.99□□□□□ -1.29
SNHG1-212ENST00000539975 SF3B1O75533 1304 aaKnown RBP eCLIP6.99□□□□□ -1.292e-7■■■■■ 35.3
SNHG1-212ENST00000539975 ALPK3Q96L96 1907 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 NT5C1B-RDH14C9J2C7 533 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 C5orf67F2Z3F1 127 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ABLIM1O14639 778 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 MAPK13O15264 365 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 SLC16A3O15427 465 aaKnown RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 DDHD2O94830 711 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 URODP06132 367 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 SRGAP2BP0DMP2 458 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 P4HA1P13674 534 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 FOSL2P15408 326 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ERCC5P28715 1186 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 HOXD13P35453 343 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 VAMP7P51809 220 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 RBP5P82980 135 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 PLCB3Q01970 1234 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 CREMQ03060 361 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 SPAG1Q07617 926 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 BIRC3Q13489 604 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 GAS6Q14393 721 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 PSMD6Q15008 389 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 STX1AQ16623 288 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 NFIL3Q16649 462 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 USP41Q3LFD5 358 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 RNFT1Q5M7Z0 435 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ANKRD40Q6AI12 368 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 JADE1Q6IE81 842 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 CENPPQ6IPU0 288 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ALKAL1Q6UXT8 129 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 DSTYKQ6XUX3 929 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 LRRC55Q6ZSA7 311 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 DDX53Q86TM3 631 aaKnown RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 METTL23Q86XA0 190 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 CEP57Q86XR8 500 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 CBWD2Q8IUF1 395 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 WDR49Q8IV35 697 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 BRSK2Q8IWQ3 736 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 COLGALT2Q8IYK4 626 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 TSEN2Q8NCE0 465 aaKnown RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 APPL2Q8NEU8 664 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 FAM200AQ8TCP9 573 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ZDHHC1Q8WTX9 485 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 TMEM174Q8WUU8 243 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 IGSF21Q96ID5 467 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ZNF560Q96MR9 790 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 CEP63Q96MT8 703 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 PPP1R10Q96QC0 940 aaKnown RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 MKNK1Q9BUB5 465 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 EMILIN2Q9BXX0 1053 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 TSPAN10Q9H1Z9 355 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 PRDM12Q9H4Q4 367 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 CWH43Q9H720 699 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 RC3H2Q9HBD1 1191 aaKnown RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 PDE11AQ9HCR9 933 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ALG13Q9NP73 1137 aaKnown RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 TLR9Q9NR96 1032 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 MRPL17Q9NRX2 175 aaKnown RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 MIOSQ9NXC5 875 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 LMCD1Q9NZU5 365 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 DNAJB4Q9UDY4 337 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ARMCX3Q9UH62 379 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 DPP7Q9UHL4 492 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ADAM28Q9UKQ2 775 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ITGA11Q9UKX5 1188 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ATXN7L1Q9ULK2 861 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ZNF232Q9UNY5 417 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 PLAGL2Q9UPG8 496 aa6.98□□□□□ -1.29
SNHG1-212ENST00000539975 ARID2Q68CP9 1835 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 A0A1W2PNR3 127 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 SMTNL1A8MU46 457 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 BECN2A8MW95 431 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 H7C4K7 107 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 SOX1O00570 391 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 PODXLO00592 558 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 PTGESO14684 152 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 IKBKBO14920 756 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 NCK2O43639 380 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 HUS1O60921 280 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 CSPG5O95196 566 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 CXCL14O95715 111 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 CAVIN2O95810 425 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 CDK11BP21127 795 aaKnown RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 PBX3P40426 434 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 SLC11A1P49279 550 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 TAF6P49848 677 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 FXR1P51114 621 aaKnown RBP eCLIP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 CLCNKBP51801 687 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 AFF1P51825 1210 aaKnown RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 STX17P56962 302 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 CYP24A1Q07973 514 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 DSC1Q08554 894 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 SMC1AQ14683 1233 aaKnown RBP6.97□□□□□ -1.29
SNHG1-212ENST00000539975 GRIN2CQ14957 1233 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 UPP1Q16831 310 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 SV2CQ496J9 727 aa6.97□□□□□ -1.29
SNHG1-212ENST00000539975 TIGD5Q53EQ6 642 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms