RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 PI4K2AQ9BTU6 479 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 VPS11Q9H270 941 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 TRPC5Q9UL62 973 aaPredicted RBP13.99□□□□□ -0.17
UBE3B-209ENST00000539584 DNPEPQ9ULA0 475 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 PCDHB4Q9Y5E5 795 aa13.99□□□□□ -0.17
UBE3B-209ENST00000539584 SMNDC1O75940 238 aaKnown RBP eCLIP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 MMP10P09238 476 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 RPS6P62753 249 aaKnown RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 IRX1P78414 480 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 GPS1Q13098 491 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 OASLQ15646 514 aaKnown RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 RSBN1LQ6PCB5 846 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 POLNQ7Z5Q5 900 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 ATP11CQ8NB49 1132 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 BSNDQ8WZ55 320 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 CDHR1Q96JP9 859 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 RMDN3Q96TC7 470 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 KIFC3Q9BVG8 833 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 MAF1Q9H063 256 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 VPS37BQ9H9H4 285 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 PXMP2Q9NR77 195 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 CNTNAP1P78357 1384 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 A8MUI8 341 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 POC1B-GALNT4F8VUJ3 575 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 PSAPP07602 524 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 CD58P19256 250 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 RPA3P35244 121 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 GCKP35557 465 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 SSR1P43307 286 aaKnown RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 TAF11Q15544 211 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 ZYXQ15942 572 aaKnown RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 SEPT7Q16181 437 aaKnown RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 PKN2Q16513 984 aaKnown RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 TDRD10Q5VZ19 366 aaKnown RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 SPOCD1Q6ZMY3 1216 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 MTMR14Q8NCE2 650 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 ZNF75CPQ92670 426 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 SLC7A6OSQ96CW6 309 aaPredicted RBP13.98□□□□□ -0.17
UBE3B-209ENST00000539584 TAAR1Q96RJ0 339 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 TBC1D10AQ9BXI6 508 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 DCLRE1BQ9H816 532 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 ANKFY1Q9P2R3 1169 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 TRIM33Q9UPN9 1127 aa13.98□□□□□ -0.17
UBE3B-209ENST00000539584 TMEM150BA6NC51 233 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 FOXO6A8MYZ6 492 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 ATP9AO75110 1047 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 SPAG7O75391 227 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 TGDSO95455 350 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 KRT1P04264 644 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 TPBGLP0DKB5 382 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 EIF2AK2P19525 551 aaKnown RBP13.97□□□□□ -0.17
UBE3B-209ENST00000539584 CCND2P30279 289 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 ARL4CP56559 192 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 HIF1AQ16665 826 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 ARHGEF16Q5VV41 709 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 CAPRIN2Q6IMN6 1127 aaKnown RBP13.97□□□□□ -0.17
UBE3B-209ENST00000539584 ADGRD1Q6QNK2 874 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 TMEM270Q6UE05 265 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 SEPT14Q6ZU15 432 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 CCDC125Q86Z20 511 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 LMNTD2Q8IXW0 634 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 PPIL6Q8IXY8 311 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 ZBED8Q8IZ13 594 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 RBBP8NLQ8NC74 664 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-209ENST00000539584 FAM13CQ8NE31 585 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 SH2D3AQ9BRG2 576 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 DHRS4Q9BTZ2 278 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 KIAA1683Q9H0B3 1180 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 AGO2Q9UKV8 859 aaKnown RBP13.97□□□□□ -0.17
UBE3B-209ENST00000539584 USTQ9Y2C2 406 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 hCG_1818297A0A087WSY0 165 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 KIF3CO14782 793 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 CCDC22O60826 627 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 PEX11AO75192 247 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 IL1BP01584 269 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 T-ENOLP0DO92 83 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 TARSP26639 723 aaKnown RBP13.97□□□□□ -0.17
UBE3B-209ENST00000539584 MARK3P27448 753 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 ZNF132P52740 706 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 MRPS35P82673 323 aaKnown RBP13.97□□□□□ -0.17
UBE3B-209ENST00000539584 TSNAXIP1Q2TAA8 658 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 VSIG10LQ86VR7 867 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 SLC35B2Q8TB61 432 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 CGRRF1Q99675 332 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 IMPG2Q9BZV3 1241 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 FHDC1Q9C0D6 1143 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-209ENST00000539584 GABBR1Q9UBS5 961 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 ZFP69BQ9UJL9 534 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 HAO1Q9UJM8 370 aa13.97□□□□□ -0.17
UBE3B-209ENST00000539584 FARP1Q9Y4F1 1045 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-209ENST00000539584 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.97□□□□□ -0.17
UBE3B-209ENST00000539584 E7ESA3 106 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 PPP1R12AO14974 1030 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-209ENST00000539584 DNAJC6O75061 913 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 STAM2O75886 525 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 NEBLO76041 1014 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 STBD1O95210 358 aa13.96□□□□□ -0.17
UBE3B-209ENST00000539584 MYCLP12524 364 aaPredicted RBP13.96□□□□□ -0.17
UBE3B-209ENST00000539584 ACADSP16219 412 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms