RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 UBTFL6P0CB48 400 aaPredicted RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 VCLP18206 1134 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 POLR2CP19387 275 aaPredicted RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 PAFAH1B1P43034 410 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 DSG1Q02413 1049 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 GBE1Q04446 702 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 MGAT5Q09328 741 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 NFIAQ12857 509 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CNGA2Q16280 664 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SGO2Q562F6 1265 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 ARL6IP4Q66PJ3 421 aaKnown RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 STYK1Q6J9G0 422 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 BTNL9Q6UXG8 535 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 BEND5Q7L4P6 421 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 TRIML2Q8N7C3 387 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 TNIP2Q8NFZ5 429 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CALML6Q8TD86 181 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 PMM1Q92871 262 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 PAGE5Q96GU1 130 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 ZNF641Q96N77 438 aaPredicted RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 OSBPL6Q9BZF3 934 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 ZMYND12Q9H0C1 365 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 VPS16Q9H269 839 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 EHD1Q9H4M9 534 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 GPBP1L1Q9HC44 474 aaPredicted RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CYLDQ9NQC7 956 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SAR1AQ9NR31 198 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 MTRF1LQ9UGC7 380 aaKnown RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CCDC194A0A1B0GVG4 234 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 A0A1W2PQC6 194 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 DCDC2CA8MYV0 355 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 H0YC42 278 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 AP3B1O00203 1094 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 PJA2O43164 708 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SCO2O43819 266 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 ZC3H11AO75152 810 aaKnown RBP eCLIP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 TBX10O75333 385 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 TFAP2AP05549 437 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 T-ENOLP0DO92 83 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SNHG28P0DPA3 235 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CDH3P22223 829 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CHRNA5P30532 468 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SLC5A2P31639 672 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SHMT1P34896 483 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CTNNA1P35221 906 aaKnown RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 AFMP43652 599 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CRKP46108 304 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 KPNA1P52294 538 aaPredicted RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 TPD52P55327 224 aaPredicted RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 EIF6P56537 245 aaKnown RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 KCNJ8Q15842 424 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 BBS9Q3SYG4 887 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 HS2ST1Q7LGA3 356 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CLEC10AQ8IUN9 316 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SLC38A6Q8IZM9 456 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 PGBD4Q96DM1 585 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 ZDHHC15Q96MV8 337 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 PIGSQ96S52 555 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 GPATCH1Q9BRR8 931 aaKnown RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 TDRD1Q9BXT4 1180 aaKnown RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CCSER1Q9C0I3 900 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SENP6Q9GZR1 1112 aaPredicted RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 POLMQ9NP87 494 aaPredicted RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CLIC5Q9NZA1 410 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 MYO3BQ8WXR4 1341 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SPDYE16A6NNV3 312 aaPredicted RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SULT1C4O75897 302 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 OLFM2O95897 454 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CD48P09326 243 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 ZCCHC18P0CG32 403 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CFL1P23528 166 aaKnown RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 PTPN4P29074 926 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CASP1P29466 404 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 IFNAR2P48551 515 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 NAPAP54920 295 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 DPYDQ12882 1025 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 HLTFQ14527 1009 aaKnown RBP eCLIP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 STILQ15468 1287 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 MAPRE2Q15555 327 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SLC15A2Q16348 729 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CERKLQ49MI3 558 aaPredicted RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CFAP221Q4G0U5 840 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 DACT2Q5SW24 774 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 STRIP1Q5VSL9 837 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SLX4IPQ5VYV7 408 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 WDR59Q6PJI9 974 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 UGT2A3Q6UWM9 527 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 C4orf22Q6V702 233 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 USP43Q70EL4 1123 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SIX5Q8N196 739 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 LRRC47Q8N1G4 583 aaKnown RBP6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SCFD1Q8WVM8 642 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 RMDN1Q96DB5 314 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SCYL1Q96KG9 808 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 FNBP1Q96RU3 617 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SNX25Q9H3E2 840 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 RIOX1Q9H6W3 641 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 FANCEQ9HB96 536 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 CNGB3Q9NQW8 809 aa6.06□□□□□ -1.44
RAB3GAP1-207ENST00000539493 SLC38A7Q9NVC3 462 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms