RNA–Protein interactions for RNA: ENST00000539357.1

POLE-213, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-213	ENST00000539357	MYO1E	Q12965	1108 aa		13.52	□□□□□ -0.25
POLE-213	ENST00000539357	MRPL58	Q14197	206 aa	Known RBP	13.52	□□□□□ -0.25
POLE-213	ENST00000539357	CRY1	Q16526	586 aa		13.52	□□□□□ -0.25
POLE-213	ENST00000539357	FBXO43	Q4G163	708 aa		13.52	□□□□□ -0.25
POLE-213	ENST00000539357	XKR9	Q5GH70	373 aa		13.52	□□□□□ -0.25
POLE-213	ENST00000539357	TPGS2	Q68CL5	300 aa		13.52	□□□□□ -0.25
POLE-213	ENST00000539357	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.52	□□□□□ -0.25
POLE-213	ENST00000539357	PDCD7	Q8N8D1	485 aa	Known RBP	13.52	□□□□□ -0.25
POLE-213	ENST00000539357	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.52	□□□□□ -0.25
POLE-213	ENST00000539357	SPACA7	Q96KW9	195 aa		13.52	□□□□□ -0.25
POLE-213	ENST00000539357	MTR	Q99707	1265 aa		13.52	□□□□□ -0.25
POLE-213	ENST00000539357	LPIN3	Q9BQK8	851 aa		13.52	□□□□□ -0.25
POLE-213	ENST00000539357	OBP2A	Q9NY56	170 aa		13.52	□□□□□ -0.25
POLE-213	ENST00000539357	NXF1	Q9UBU9	619 aa	Known RBP	13.52	□□□□□ -0.25
POLE-213	ENST00000539357	TBX20	Q9UMR3	447 aa		13.52	□□□□□ -0.25
POLE-213	ENST00000539357	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.52	□□□□□ -0.25
POLE-213	ENST00000539357	MYO18A	Q92614	2054 aa	Known RBP	13.51	□□□□□ -0.25
POLE-213	ENST00000539357	OBSL1	O75147	1896 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	ASAP2	O43150	1006 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	TRAPPC3	O43617	180 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	EDN1	P05305	212 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	EPHB3	P54753	998 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	ZNF33A	Q06730	810 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	TMEM132A	Q24JP5	1023 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	EMC10	Q5UCC4	262 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	EEF1DP3	Q658K8	133 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	B4GALNT3	Q6L9W6	998 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	DHRS13	Q6UX07	377 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	B3GNT9	Q6UX72	402 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	MAEA	Q7L5Y9	396 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	SLC41A1	Q8IVJ1	513 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	REXO1	Q8N1G1	1221 aa	Known RBP	13.51	□□□□□ -0.25
POLE-213	ENST00000539357	ALLC	Q8N6M5	410 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	CEP76	Q8TAP6	659 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	TCP11	Q8WWU5	503 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	NAF1	Q96HR8	494 aa	Known RBP	13.51	□□□□□ -0.25
POLE-213	ENST00000539357	PPP1R10	Q96QC0	940 aa	Known RBP	13.51	□□□□□ -0.25
POLE-213	ENST00000539357	PDZD7	Q9H5P4	517 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	TASP1	Q9H6P5	420 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.51	□□□□□ -0.25
POLE-213	ENST00000539357	IL17B	Q9UHF5	180 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	BTBD3	Q9Y2F9	522 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	MYOF	Q9NZM1	2061 aa		13.51	□□□□□ -0.25
POLE-213	ENST00000539357	TMEM131	Q92545	1883 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357		H7C4K7	107 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	SGK1	O00141	431 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	SYP	P08247	313 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	HLA-E	P13747	358 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	GLRA2	P23416	452 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	NMT1	P30419	496 aa	Known RBP	13.5	□□□□□ -0.25
POLE-213	ENST00000539357	TIE1	P35590	1138 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	RFC5	P40937	340 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	CSRP3	P50461	194 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	ARHGAP15	Q53QZ3	475 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	HIST2H2BC	Q6DN03	193 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	GLRX5	Q86SX6	157 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	SGMS1	Q86VZ5	419 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	TICAM2	Q86XR7	235 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	RGL4	Q8IZJ4	473 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	MAB21L3	Q8N8X9	362 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	TXNDC5	Q8NBS9	432 aa	Known RBP	13.5	□□□□□ -0.25
POLE-213	ENST00000539357	STKLD1	Q8NE28	680 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	USP13	Q92995	863 aa	Predicted RBP	13.5	□□□□□ -0.25
POLE-213	ENST00000539357	SLK	Q9H2G2	1235 aa	Predicted RBP	13.5	□□□□□ -0.25
POLE-213	ENST00000539357	ECT2	Q9H8V3	914 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	RGL1	Q9NZL6	768 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	TPCN1	Q9ULQ1	816 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	MMP17	Q9ULZ9	603 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
POLE-213	ENST00000539357	WNT6	Q9Y6F9	365 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	AK5	Q9Y6K8	562 aa		13.5	□□□□□ -0.25
POLE-213	ENST00000539357	ANK1	P16157	1881 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	PODXL	O00592	558 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	RRP8	O43159	456 aa	Known RBP	13.49	□□□□□ -0.25
POLE-213	ENST00000539357	KLF8	O95600	359 aa	Predicted RBP	13.49	□□□□□ -0.25
POLE-213	ENST00000539357	QARS	P47897	775 aa	Known RBP	13.49	□□□□□ -0.25
POLE-213	ENST00000539357	NFKB2	Q00653	900 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	MESP2	Q0VG99	397 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	GRIK2	Q13002	908 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	SLC14A1	Q13336	389 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	PLD1	Q13393	1074 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	TFDP1	Q14186	410 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	CTTN	Q14247	550 aa	Known RBP	13.49	□□□□□ -0.25
POLE-213	ENST00000539357	ARHGAP40	Q5TG30	622 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	KRT25	Q7Z3Z0	450 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	TRIML1	Q8N9V2	468 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	ATAD1	Q8NBU5	361 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	RDM1	Q8NG50	284 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	CPNE5	Q9HCH3	593 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	CD93	Q9NPY3	652 aa		13.49	□□□□□ -0.25
POLE-213	ENST00000539357	UBR5	O95071	2799 aa	Predicted RBP	13.49	□□□□□ -0.25
POLE-213	ENST00000539357	SPTAN1	Q13813	2472 aa	Known RBP	13.48	□□□□□ -0.25
POLE-213	ENST00000539357	TCRBV21S2A2	A0A5A6	115 aa		13.48	□□□□□ -0.25
POLE-213	ENST00000539357	CAPN8	A6NHC0	703 aa		13.48	□□□□□ -0.25
POLE-213	ENST00000539357	ERVH48-1	M5A8F1	160 aa		13.48	□□□□□ -0.25
POLE-213	ENST00000539357	C6	P13671	934 aa		13.48	□□□□□ -0.25
POLE-213	ENST00000539357	YWHAB	P31946	246 aa	Known RBP	13.48	□□□□□ -0.25
POLE-213	ENST00000539357	ALDH1A3	P47895	512 aa		13.48	□□□□□ -0.25
POLE-213	ENST00000539357	ZNF280D	Q6N043	979 aa		13.48	□□□□□ -0.25
POLE-213	ENST00000539357	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms