RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SLC28A3Q9HAS3 691 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 DSEQ9UL01 958 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 NME7Q9Y5B8 376 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 ATG2AQ2TAZ0 1938 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 F8VZ95 297 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 SOD2P04179 222 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 TYMPP19971 482 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 WARSP23381 471 aaKnown RBP25.12■■□□□ 1.61
TMEM260-202ENST00000538838 CASP14P31944 242 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 KRT17Q04695 432 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 INCA1Q0VD86 236 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 TBX2Q13207 712 aaPredicted RBP25.12■■□□□ 1.61
TMEM260-202ENST00000538838 PPFIBP1Q86W92 1011 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 GPIHBP1Q8IV16 184 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 TMEM86AQ8N2M4 240 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 OR6B3Q8NGW1 331 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 TIFAQ96CG3 184 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 SPAG5Q96R06 1193 aa25.12■■□□□ 1.61
TMEM260-202ENST00000538838 ALG13Q9NP73 1137 aaKnown RBP25.12■■□□□ 1.61
TMEM260-202ENST00000538838 A0A1W2PQJ5 194 aa25.11■■□□□ 1.61
TMEM260-202ENST00000538838 YWHAEP62258 255 aaKnown RBP25.11■■□□□ 1.61
TMEM260-202ENST00000538838 ORC1Q13415 861 aa25.11■■□□□ 1.61
TMEM260-202ENST00000538838 USP41Q3LFD5 358 aa25.11■■□□□ 1.61
TMEM260-202ENST00000538838 VARS2Q5ST30 1063 aaKnown RBP25.11■■□□□ 1.61
TMEM260-202ENST00000538838 METTL23Q86XA0 190 aa25.11■■□□□ 1.61
TMEM260-202ENST00000538838 JAKMIP2Q96AA8 810 aa25.11■■□□□ 1.61
TMEM260-202ENST00000538838 IQCDQ96DY2 449 aa25.11■■□□□ 1.61
TMEM260-202ENST00000538838 CAPN11Q9UMQ6 739 aa25.11■■□□□ 1.61
TMEM260-202ENST00000538838 PCDHB4Q9Y5E5 795 aa25.11■■□□□ 1.61
TMEM260-202ENST00000538838 TRIOBPQ9H2D6 2365 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 FOXN3O00409 490 aaPredicted RBP25.1■■□□□ 1.61
TMEM260-202ENST00000538838 CILPO75339 1184 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 KRT5P13647 590 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 USP8P40818 1118 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 NDST1P52848 882 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 YWHAHQ04917 246 aaPredicted RBP25.1■■□□□ 1.61
TMEM260-202ENST00000538838 GOLGA8FQ08AF8 430 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 GOLGA8DPQ0D2H9 430 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 LRIT3Q3SXY7 679 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 ZNF394Q53GI3 561 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 OVOS1Q6IE37 1185 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 TMEM270Q6UE05 265 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 VPS52Q8N1B4 723 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 FBXO22Q8NEZ5 403 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 TWNKQ96RR1 684 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 RTP3Q9BQQ7 232 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 TTPALQ9BTX7 342 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 C11orf84Q9BUA3 381 aaPredicted RBP25.1■■□□□ 1.61
TMEM260-202ENST00000538838 EDEM3Q9BZQ6 932 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 SNX25Q9H3E2 840 aa25.1■■□□□ 1.61
TMEM260-202ENST00000538838 BARX2Q9UMQ3 279 aaPredicted RBP25.1■■□□□ 1.61
TMEM260-202ENST00000538838 LRRC53A6NM62 1247 aa25.09■■□□□ 1.61
TMEM260-202ENST00000538838 GABRDO14764 452 aa25.09■■□□□ 1.61
TMEM260-202ENST00000538838 RB1P06400 928 aa25.09■■□□□ 1.61
TMEM260-202ENST00000538838 WHAMMQ8TF30 809 aa25.09■■□□□ 1.61
TMEM260-202ENST00000538838 ANP32BQ92688 251 aaKnown RBP25.09■■□□□ 1.61
TMEM260-202ENST00000538838 CHST7Q9NS84 486 aa25.09■■□□□ 1.61
TMEM260-202ENST00000538838 DDX43Q9NXZ2 648 aaKnown RBP25.09■■□□□ 1.61
TMEM260-202ENST00000538838 CSPG5O95196 566 aa25.08■■□□□ 1.61
TMEM260-202ENST00000538838 ACAT1P24752 427 aaKnown RBP25.08■■□□□ 1.61
TMEM260-202ENST00000538838 LMO2P25791 158 aa25.08■■□□□ 1.61
TMEM260-202ENST00000538838 GNL1P36915 607 aaPredicted RBP25.08■■□□□ 1.61
TMEM260-202ENST00000538838 GLUD2P49448 558 aa25.08■■□□□ 1.61
TMEM260-202ENST00000538838 PDXDC1Q6P996 788 aa25.08■■□□□ 1.61
TMEM260-202ENST00000538838 PRSS55Q6UWB4 352 aaPredicted RBP25.08■■□□□ 1.61
TMEM260-202ENST00000538838 RBBP8NLQ8NC74 664 aaPredicted RBP25.08■■□□□ 1.61
TMEM260-202ENST00000538838 ARNTL2Q8WYA1 636 aa25.08■■□□□ 1.61
TMEM260-202ENST00000538838 RIN2Q8WYP3 895 aaPredicted RBP25.08■■□□□ 1.61
TMEM260-202ENST00000538838 ELOVL4Q9GZR5 314 aa25.08■■□□□ 1.61
TMEM260-202ENST00000538838 STXBP5LQ9Y2K9 1186 aa25.08■■□□□ 1.61
TMEM260-202ENST00000538838 TRANK1O15050 2925 aa25.08■■□□□ 1.61
TMEM260-202ENST00000538838 A8MXQ7 604 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 C2CD2LO14523 706 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 TPM1P09493 284 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 PDGFRBP09619 1106 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 FAM163BP0C2L3 166 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 DNAJB1P25685 340 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 LHX1P48742 406 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 ZBED6P86452 979 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 KIAA1841Q6NSI8 718 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 TTC39CQ8N584 583 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 SPATA18Q8TC71 538 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 SPPL3Q8TCT6 385 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 ZBP1Q9H171 429 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 DPEP3Q9H4B8 488 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 FAM124BQ9H5Z6 455 aaPredicted RBP25.08■■□□□ 1.6
TMEM260-202ENST00000538838 CNTN6Q9UQ52 1028 aa25.08■■□□□ 1.6
TMEM260-202ENST00000538838 LUC7L2Q9Y383 392 aaKnown RBP25.08■■□□□ 1.6
TMEM260-202ENST00000538838 MFAP3LO75121 409 aa25.07■■□□□ 1.6
TMEM260-202ENST00000538838 GFPT2O94808 682 aa25.07■■□□□ 1.6
TMEM260-202ENST00000538838 OAZ2O95190 189 aa25.07■■□□□ 1.6
TMEM260-202ENST00000538838 URODP06132 367 aa25.07■■□□□ 1.6
TMEM260-202ENST00000538838 SOX5P35711 763 aa25.07■■□□□ 1.6
TMEM260-202ENST00000538838 STAT1P42224 750 aa25.07■■□□□ 1.6
TMEM260-202ENST00000538838 ZNF132P52740 706 aa25.07■■□□□ 1.6
TMEM260-202ENST00000538838 ADKP55263 362 aaKnown RBP25.07■■□□□ 1.6
TMEM260-202ENST00000538838 DSG1Q02413 1049 aa25.07■■□□□ 1.6
TMEM260-202ENST00000538838 MRPL58Q14197 206 aaKnown RBP25.07■■□□□ 1.6
TMEM260-202ENST00000538838 E4F1Q66K89 784 aaPredicted RBP25.07■■□□□ 1.6
TMEM260-202ENST00000538838 FAM71AQ8IYT1 594 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms