RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 DHX37Q8IY37 1157 aaKnown RBP26.37■■□□□ 1.81
RAB40C-204ENST00000538492 WDTC1Q8N5D0 677 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 TMEM35BQ8NCS4 154 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 IPO4Q8TEX9 1081 aaKnown RBP26.37■■□□□ 1.81
RAB40C-204ENST00000538492 CABS1Q96KC9 395 aa26.37■■□□□ 1.81
RAB40C-204ENST00000538492 STMN4Q9H169 189 aaPredicted RBP26.37■■□□□ 1.81
RAB40C-204ENST00000538492 KRT1P04264 644 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 SF3A3Q12874 501 aaKnown RBP eCLIP26.36■■□□□ 1.81
RAB40C-204ENST00000538492 MFSD7Q6UXD7 560 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 PRMT1Q99873 361 aaKnown RBP26.36■■□□□ 1.81
RAB40C-204ENST00000538492 ROPN1BQ9BZX4 212 aaPredicted RBP26.36■■□□□ 1.81
RAB40C-204ENST00000538492 ROPN1Q9HAT0 212 aaPredicted RBP26.36■■□□□ 1.81
RAB40C-204ENST00000538492 TMEM51Q9NW97 253 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 IGKV6-21A0A0C4DH24 114 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 C5orf60A6NFR6 353 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 FOXO6A8MYZ6 492 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 CLCN3P51790 818 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 SLC20A2Q08357 652 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 ATF7IP2Q5U623 682 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 IZUMO3Q5VZ72 239 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 EEF1DP3Q658K8 133 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 MFSD5Q6N075 450 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 EXOC3L1Q86VI1 746 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 CCDC89Q8N998 374 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 SLITRK1Q96PX8 696 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 GGA2Q9UJY4 613 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 POLIQ9UNA4 740 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 CAPN7Q9Y6W3 813 aa26.36■■□□□ 1.81
RAB40C-204ENST00000538492 EVPLQ92817 2033 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 LGR5O75473 907 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 CPP00450 1065 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 ASPAP45381 313 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 IFNAR2P48551 515 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 GKAP1Q5VSY0 366 aaPredicted RBP26.35■■□□□ 1.81
RAB40C-204ENST00000538492 MPZL3Q6UWV2 235 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 TMEM192Q8IY95 271 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 CACNA2D3Q8IZS8 1091 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 KAT2BQ92831 832 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 LSM8O95777 96 aaKnown RBP26.35■■□□□ 1.81
RAB40C-204ENST00000538492 KRT19P08727 400 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 RAP1GAPP47736 663 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 CAV1Q03135 178 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 GLIS1Q8NBF1 620 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 XYLT2Q9H1B5 865 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 RBPJLQ9UBG7 517 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 DNPEPQ9ULA0 475 aa26.35■■□□□ 1.81
RAB40C-204ENST00000538492 TCRBV5S1A1TA0A578 114 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 CETN2P41208 172 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 IREB2P48200 963 aaKnown RBP26.34■■□□□ 1.81
RAB40C-204ENST00000538492 ERICH1Q86X53 443 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 RCOR2Q8IZ40 523 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 ZNF317Q96PQ6 595 aaPredicted RBP26.34■■□□□ 1.81
RAB40C-204ENST00000538492 C2orf40Q9H1Z8 148 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 MINDY3Q9H8M7 445 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 NINJ2Q9NZG7 142 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 CSDE1O75534 798 aaKnown RBP26.34■■□□□ 1.81
RAB40C-204ENST00000538492 CREB1P16220 341 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 P3H1Q32P28 736 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 EFCAB12Q6NXP0 572 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 TSHZ1Q6ZSZ6 1077 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 TAOK1Q7L7X3 1001 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 PLPPR4Q7Z2D5 763 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 HAUS1Q96CS2 278 aa26.34■■□□□ 1.81
RAB40C-204ENST00000538492 MPHOSPH6Q99547 160 aaKnown RBP26.34■■□□□ 1.81
RAB40C-204ENST00000538492 JPH2Q9BR39 696 aaPredicted RBP26.34■■□□□ 1.81
RAB40C-204ENST00000538492 FHDC1Q9C0D6 1143 aaPredicted RBP26.34■■□□□ 1.81
RAB40C-204ENST00000538492 GAS2O43903 313 aaKnown RBP26.33■■□□□ 1.81
RAB40C-204ENST00000538492 CXCL8P10145 99 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 ORC1Q13415 861 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 KCTD2Q14681 263 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 ARHGEF2Q92974 986 aaKnown RBP26.33■■□□□ 1.81
RAB40C-204ENST00000538492 RBM41Q96IZ5 413 aaKnown RBP26.33■■□□□ 1.81
RAB40C-204ENST00000538492 PTPRHQ9HD43 1115 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 PDGFCQ9NRA1 345 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 PPME1Q9Y570 386 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 ACKR2O00590 384 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 TNNC2P02585 160 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 CD19P15391 556 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 PROZP22891 400 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 KLRC2P26717 231 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 SURF1Q15526 300 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 FBXW10Q5XX13 1052 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 ARMC9Q7Z3E5 817 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 C9orf72Q96LT7 481 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 PPP1R16BQ96T49 567 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 MMP19Q99542 508 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 TJP2Q9UDY2 1190 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 ZNF148Q9UQR1 794 aa26.33■■□□□ 1.81
RAB40C-204ENST00000538492 GOLGA8SH3BPF8 625 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 LIASO43766 372 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 SLC25A27O95847 323 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 IQCF3P0C7M6 154 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 ZSCAN5DPP0CG00 497 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 TXNP10599 105 aaKnown RBP26.32■■□□□ 1.8
RAB40C-204ENST00000538492 IGBP1P78318 339 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 LACTBP83111 547 aaPredicted RBP26.32■■□□□ 1.8
RAB40C-204ENST00000538492 DENND1BQ6P3S1 775 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 CCDC121Q6ZUS5 278 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 ANKRD36BP1Q96IX9 119 aa26.32■■□□□ 1.8
RAB40C-204ENST00000538492 SERPINB12Q96P63 405 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms