RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 THEGQ9P2T0 379 aa3.82□□□□□ -1.8
PTPN22-211ENST00000538253 MYH9P35579 1960 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 MYH7BA7E2Y1 1941 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 TMCO5BA8MYB1 307 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 BOLA2-SMG1P6H3BVE0 249 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 KIF5CO60282 957 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 CPB1P15086 417 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 WARSP23381 471 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 HOXA11P31270 313 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 MLH1P40692 756 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SCNN1GP51170 649 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 NUBP1P53384 320 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 OXCT1P55809 520 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 NR1H3Q13133 447 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SMAD4Q13485 552 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 RAB33AQ14088 237 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SPECC1Q5M775 1068 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 UBXN11Q5T124 520 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 C15orf39Q6ZRI6 1047 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 DAW1Q8N136 415 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 VN1R2Q8NFZ6 395 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SCFD1Q8WVM8 642 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 HPDLQ96IR7 371 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PPP1R10Q96QC0 940 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PRRX2Q99811 253 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 IER2Q9BTL4 223 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 UBXN6Q9BZV1 441 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 IQCGQ9H095 443 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 BLZF1Q9H2G9 400 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PRO3102Q9H379 93 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PNPLA8Q9NP80 782 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 AVENQ9NQS1 362 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 OLA1Q9NTK5 396 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 THG1LQ9NWX6 298 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 OGFRQ9NZT2 677 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 AGAP1Q9UPQ3 857 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF510Q9Y2H8 683 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 MRPS17Q9Y2R5 130 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 N6AMT1Q9Y5N5 214 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 KIAA0100Q14667 2235 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 LACTBL1A8MY62 500 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 KPNA7A9QM74 516 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 HMGB1P1B2RPK0 211 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 DPYSL4O14531 572 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 CYB561D2O14569 222 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PRRG1O14668 218 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SERPINC1P01008 464 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 CA3P07451 260 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 RALAP11233 206 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 FERP16591 822 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 IBSPP21815 317 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 IGFBP4P22692 258 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PFKPQ01813 784 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 GCNT1Q02742 428 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 TAP1Q03518 808 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PTK2Q05397 1052 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 NCOA4Q13772 614 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 HSP90B2PQ58FF3 399 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 AGMOQ6ZNB7 445 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 RBM43Q6ZSC3 357 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 CACNA2D4Q7Z3S7 1137 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 KCNK18Q7Z418 384 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 ZC3H3Q8IXZ2 948 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 COLGALT2Q8IYK4 626 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 ARNTL2Q8WYA1 636 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 TSC1Q92574 1164 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 MRPS31Q92665 395 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 HLA-CQ95604 372 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PABPC5Q96DU9 382 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SHDQ96IW2 340 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 CPB2Q96IY4 423 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SLITRK1Q96PX8 696 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SPAG5Q96R06 1193 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 NT5C1AQ9BXI3 368 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 PBX4Q9BYU1 374 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 DCLK3Q9C098 648 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SEMA6BQ9H3T3 888 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 NRDE2Q9H7Z3 1164 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 WDR70Q9NW82 654 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 WDR35Q9P2L0 1181 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 WRAP73Q9P2S5 460 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 MTRRQ9UBK8 725 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 SLC12A6Q9UHW9 1150 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 CD207Q9UJ71 328 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 STRIP2Q9ULQ0 834 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 CTNND2Q9UQB3 1225 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 COLQQ9Y215 455 aaPredicted RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 USTQ9Y2C2 406 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 DOCK3Q8IZD9 2030 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 TYW5A2RUC4 315 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 M0QZQ0 153 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 NRP1O14786 923 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 NCAM2O15394 837 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 ERBB2P04626 1255 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 MYBP10242 640 aa3.81□□□□□ -1.8
PTPN22-211ENST00000538253 DLATP10515 647 aaKnown RBP3.81□□□□□ -1.8
PTPN22-211ENST00000538253 STIP1P31948 543 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms