RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 NCF4Q15080 339 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TSPAN14Q8NG11 270 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 SERPINB12Q96P63 405 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 C11orf70Q9BRQ4 267 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PCDH12Q9NPG4 1184 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 GGA1Q9UJY5 639 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 COMMD3-BMI1R4GMX3 469 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ROS1P08922 2347 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF263O14978 683 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ATMINO43313 823 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PLEKP08567 350 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 FGFR3P22607 806 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 QARSP47897 775 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 NME5P56597 212 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 SESN2P58004 480 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 RALGDSQ12967 914 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TTC39BQ5VTQ0 682 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 GATAD2AQ86YP4 633 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 POLR1BQ9H9Y6 1135 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 AGPAT5Q9NUQ2 364 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TMEM161AQ9NX61 479 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TFCP2L1Q9NZI6 479 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 NEU2Q9Y3R4 380 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PFASO15067 1338 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 XRCC4Q13426 336 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TUBA3CQ13748 450 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 RWDD4Q6NW29 188 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 RIBC1Q8N443 379 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 GOLPH3Q9H4A6 298 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 RERGLQ9H628 205 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ATP6V1C1P21283 382 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TFDP2Q14188 446 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 C11orf88Q6PI97 169 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TBCKQ8TEA7 893 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 BFARQ9NZS9 450 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TOMM70O94826 608 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ADAMTS2O95450 1211 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PARNO95453 639 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 IFNAR1P17181 557 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 NUP62P37198 522 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 NCKAP1LP55160 1127 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 SHC4Q6S5L8 630 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ARHGEF19Q8IW93 802 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 CPSF3Q9UKF6 684 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PIK3R1P27986 724 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 CCR3P51677 355 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 C3orf62Q6ZUJ4 267 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 HPS3Q969F9 1004 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 TBATAQ96M53 351 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 NYXQ9GZU5 481 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PPCSQ9HAB8 311 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ARHGEF10O15013 1369 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 FKBP6O75344 327 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PGM3O95394 542 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PTPN4P29074 926 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 COX10Q12887 443 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ZSCAN18Q8TBC5 510 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PYDC1Q8WXC3 89 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PLEKHA8Q96JA3 519 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PABPC3Q9H361 631 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 FBXO9Q9UK97 447 aaPredicted RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 UTYO14607 1347 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ITIH6Q6UXX5 1313 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 IREB2P48200 963 aaKnown RBP5.91□□□□□ -1.46
CSMD1-215ENST00000537824 KRT72Q14CN4 511 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PDZK1Q5T2W1 519 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ARHGEF16Q5VV41 709 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 PODNQ7Z5L7 613 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 DEFB107AQ8IZN7 70 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 OXER1Q8TDS5 423 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 JMJD4Q9H9V9 463 aa5.91□□□□□ -1.46
CSMD1-215ENST00000537824 ARHGAP31Q2M1Z3 1444 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 NR5A2O00482 541 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 TRAPPC3O43617 180 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 VAV1P15498 845 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 PCNX4Q63HM2 1172 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 LRRC8DQ7L1W4 858 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 KYQ8NBH2 561 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 NAT14Q8WUY8 206 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 RSPH1Q8WYR4 309 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 SEC24AO95486 1093 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF844Q08AG5 666 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 NAALADL2Q58DX5 795 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 RHOT1Q8IXI2 618 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 WHRNQ9P202 907 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 EP300Q09472 2414 aaPredicted RBP5.9□□□□□ -1.46
CSMD1-215ENST00000537824 FCHO1O14526 889 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 APOL1O14791 398 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 UXS1Q8NBZ7 420 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 OR6Y1Q8NGX8 325 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 SMIM31A0A1B0GVY4 71 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 A0A1W2PQ72 361 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 SPAG6O75602 509 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 POU5F2Q8N7G0 328 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 E2F7Q96AV8 911 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 SUPT3HB4E1H0 165 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 EIF2AK2P19525 551 aaKnown RBP5.9□□□□□ -1.46
CSMD1-215ENST00000537824 CDH6P55285 790 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 IDI1Q13907 227 aa5.9□□□□□ -1.46
CSMD1-215ENST00000537824 NFIL3Q16649 462 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms