RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 ERMP1Q7Z2K6 904 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 LRRTM3Q86VH5 581 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 EFCAB13Q8IY85 973 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 ZSWIM2Q8NEG5 633 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 PSMG2Q969U7 264 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 E2F7Q96AV8 911 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 DNAJC19Q96DA6 116 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 LPIN3Q9BQK8 851 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 PYM1Q9BRP8 204 aaKnown RBP9.15□□□□□ -0.94
USP28-203ENST00000537490 STRA6Q9BX79 667 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 ZCWPW1Q9H0M4 648 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 CHRDQ9H2X0 955 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 ATXN3LQ9H3M9 355 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 PRMT8Q9NR22 394 aaPredicted RBP9.15□□□□□ -0.94
USP28-203ENST00000537490 DPP3Q9NY33 737 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 TBC1D7Q9P0N9 293 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 C2CD2Q9Y426 696 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 ASB3Q9Y575 518 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 PCDHGA2Q9Y5H1 932 aa9.15□□□□□ -0.94
USP28-203ENST00000537490 SRPRBQ9Y5M8 271 aaKnown RBP9.15□□□□□ -0.94
USP28-203ENST00000537490 CHADO15335 359 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 TDGF1P13385 188 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 ATF6P18850 670 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 ABCD1P33897 745 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 SOX9P48436 509 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 TUFMP49411 452 aaKnown RBP9.14□□□□□ -0.95
USP28-203ENST00000537490 TAF6P49848 677 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 CYP4F8P98187 520 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 POU5F1Q01860 360 aaKnown RBP9.14□□□□□ -0.95
USP28-203ENST00000537490 CEBPZQ03701 1054 aaKnown RBP9.14□□□□□ -0.95
USP28-203ENST00000537490 FCHO2Q0JRZ9 810 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 RESTQ13127 1097 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 GAS6Q14393 721 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 MGAT5BQ3V5L5 792 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 WDR44Q5JSH3 913 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 RRAGBQ5VZM2 374 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 MAMSTRQ6ZN01 415 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 METTL23Q86XA0 190 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 YAF2Q8IY57 180 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 TTC8Q8TAM2 541 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 FAM200AQ8TCP9 573 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 CSGALNACT1Q8TDX6 532 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 GIPC2Q8TF65 315 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 POMGNT1Q8WZA1 660 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 ZFYVE19Q96K21 471 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 SEPT5Q99719 369 aaPredicted RBP9.14□□□□□ -0.95
USP28-203ENST00000537490 PANK2Q9BZ23 570 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 IL21Q9HBE4 155 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 HSFX1Q9UBD0 423 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 STK17AQ9UEE5 414 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 CCDC39Q9UFE4 941 aa9.14□□□□□ -0.95
USP28-203ENST00000537490 PDCD11Q14690 1871 aaKnown RBP9.14□□□□□ -0.95
USP28-203ENST00000537490 MYH11P35749 1972 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 SLC38A8A6NNN8 435 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 KPNA7A9QM74 516 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
USP28-203ENST00000537490 DPYSL4O14531 572 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 HAPLN1P10915 354 aaPredicted RBP9.13□□□□□ -0.95
USP28-203ENST00000537490 SYT1P21579 422 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 CASP5P51878 434 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 KPNA1P52294 538 aaPredicted RBP9.13□□□□□ -0.95
USP28-203ENST00000537490 MLLT6P55198 1093 aaPredicted RBP9.13□□□□□ -0.95
USP28-203ENST00000537490 SATB1Q01826 763 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 POSTNQ15063 836 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 L1TD1Q5T7N2 865 aaKnown RBP9.13□□□□□ -0.95
USP28-203ENST00000537490 TXNDC11Q6PKC3 985 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 SV2BQ7L1I2 683 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 ITIH5Q86UX2 942 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 THEM5Q8N1Q8 247 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 HVCN1Q96D96 273 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 SAAL1Q96ER3 474 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 FAM84AQ96KN4 292 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 ACCSQ96QU6 501 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 FAM213AQ9BRX8 229 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 SLC46A2Q9BY10 475 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 FGFBP2Q9BYJ0 223 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 SMG9Q9H0W8 520 aaKnown RBP9.13□□□□□ -0.95
USP28-203ENST00000537490 EPC1Q9H2F5 836 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 TASP1Q9H6P5 420 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 C8orf33Q9H7E9 229 aaPredicted RBP9.13□□□□□ -0.95
USP28-203ENST00000537490 MRPL44Q9H9J2 332 aaKnown RBP9.13□□□□□ -0.95
USP28-203ENST00000537490 RBM12Q9NTZ6 932 aaKnown RBP9.13□□□□□ -0.95
USP28-203ENST00000537490 TMLHEQ9NVH6 421 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 GTSE1Q9NYZ3 720 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 NCDNQ9UBB6 729 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 SEL1LQ9UBV2 794 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 DSEQ9UL01 958 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 SMG5Q9UPR3 1016 aaKnown RBP9.13□□□□□ -0.95
USP28-203ENST00000537490 MYO15AQ9UKN7 3530 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 MIA3Q5JRA6 1907 aa9.13□□□□□ -0.95
USP28-203ENST00000537490 FANCMQ8IYD8 2048 aa9.12□□□□□ -0.95
USP28-203ENST00000537490 A0A087X0B3 334 aa9.12□□□□□ -0.95
USP28-203ENST00000537490 MED19A0JLT2 244 aaPredicted RBP9.12□□□□□ -0.95
USP28-203ENST00000537490 MYBPHLA2RUH7 354 aa9.12□□□□□ -0.95
USP28-203ENST00000537490 GOLGA8IPA6NC78 632 aa9.12□□□□□ -0.95
USP28-203ENST00000537490 GOLGA8JA6NMD2 632 aa9.12□□□□□ -0.95
USP28-203ENST00000537490 SPECC1L-ADORA2AF8WAN1 911 aa9.12□□□□□ -0.95
USP28-203ENST00000537490 IL18RAPO95256 599 aa9.12□□□□□ -0.95
USP28-203ENST00000537490 GCNT3O95395 438 aa9.12□□□□□ -0.95
USP28-203ENST00000537490 PRAMEF12O95522 483 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms