RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 PTTG1IPP53801 180 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 ICA1Q05084 483 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 PIGFQ07326 219 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 TBC1D10BQ4KMP7 808 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-208ENST00000536710 HSP90AB4PQ58FF6 505 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 UBXN11Q5T124 520 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 TSHZ3Q63HK5 1081 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 FBXO38Q6PIJ6 1188 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 GLB1LQ6UWU2 654 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 SLC30A10Q6XR72 485 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 LIMS2Q7Z4I7 341 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 POLNQ7Z5Q5 900 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 YAF2Q8IY57 180 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 SDR16C5Q8N3Y7 309 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 NSUN7Q8NE18 718 aaKnown RBP6.47□□□□□ -1.37
PRKDC-208ENST00000536710 MYRIPQ8NFW9 859 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 NUP133Q8WUM0 1156 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 MUL1Q969V5 352 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 SPSB4Q96A44 273 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 MARS2Q96GW9 593 aaKnown RBP6.47□□□□□ -1.37
PRKDC-208ENST00000536710 TMEM41AQ96HV5 264 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 SCLT1Q96NL6 688 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 SMOQ99835 787 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 TTYH3Q9C0H2 523 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 CHST8Q9H2A9 424 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 MRPS18AQ9NVS2 196 aaKnown RBP6.47□□□□□ -1.37
PRKDC-208ENST00000536710 ZSCAN32Q9NX65 697 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 MAN2B2Q9Y2E5 1009 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 SLC30A1Q9Y6M5 507 aa6.47□□□□□ -1.37
PRKDC-208ENST00000536710 NPHP1O15259 732 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 FFAR2O15552 330 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 PIP5K1CO60331 668 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 PLATP00750 562 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 ZSCAN22P10073 491 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-208ENST00000536710 MYL4P12829 197 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 CHRM3P20309 590 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 NHLH2Q02577 135 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 ZNF844Q08AG5 666 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 RAPGEF1Q13905 1077 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 PUM3Q15397 648 aaKnown RBP6.46□□□□□ -1.38
PRKDC-208ENST00000536710 TUBB8Q3ZCM7 444 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 CCDC38Q502W7 563 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 DCAF17Q5H9S7 520 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-208ENST00000536710 METTL24Q5JXM2 366 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 SYT12Q8IV01 421 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 CFAP52Q8N1V2 620 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 FANCBQ8NB91 859 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 CCDC150Q8NCX0 1101 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 TRIM63Q969Q1 353 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 SPATA5L1Q9BVQ7 753 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 ZCCHC4Q9H5U6 513 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 MID2Q9UJV3 735 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 TBC1D30Q9Y2I9 924 aa6.46□□□□□ -1.38
PRKDC-208ENST00000536710 CCDC189A1A4V9 331 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 OTOL1A6NHN0 477 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-208ENST00000536710 DBX1A6NMT0 343 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 RAB27BO00194 218 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 TXNP10599 105 aaKnown RBP6.45□□□□□ -1.38
PRKDC-208ENST00000536710 IL1R1P14778 569 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 TXKP42681 527 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 SLFN5Q08AF3 891 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 TAPT1Q6NXT6 567 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 ZFPM1Q8IX07 1006 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 DNERQ8NFT8 737 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 PPM1EQ8WY54 764 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 LTV1Q96GA3 475 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-208ENST00000536710 MOGAT1Q96PD6 335 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 TRIB1Q96RU8 372 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 PNKPQ96T60 521 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 TTLL2Q9BWV7 592 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 GPR87Q9BY21 358 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 HESX1Q9UBX0 185 aa6.45□□□□□ -1.38
PRKDC-208ENST00000536710 EIF2B4Q9UI10 523 aaKnown RBP6.45□□□□□ -1.38
PRKDC-208ENST00000536710 USP15Q9Y4E8 981 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-208ENST00000536710 AATKQ6ZMQ8 1374 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 GOLGA6L6A8MZA4 724 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 LEFTY2O00292 366 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 PODXLO00592 558 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 GPR42O15529 346 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 PLA2G6O60733 806 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 XRCC6P12956 609 aaKnown RBP eCLIP6.44□□□□□ -1.38
PRKDC-208ENST00000536710 COMTP21964 271 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 GCSHP23434 173 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 IL1R2P27930 398 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 APOBEC3AP31941 199 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-208ENST00000536710 ALDH9A1P49189 494 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 SATB1Q01826 763 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 CRHR2Q13324 411 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 BLMHQ13867 455 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 SLC29A2Q14542 456 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 IQCB1Q15051 598 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 FOXR2Q6PJQ5 311 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 LAYNQ6UX15 382 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 ZDHHC24Q6UX98 284 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-208ENST00000536710 PPP1R32Q7Z5V6 425 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 C1QL4Q86Z23 238 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 MYCT1Q8N699 235 aa6.44□□□□□ -1.38
PRKDC-208ENST00000536710 SLC46A1Q96NT5 459 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms