RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TMEM174Q8WUU8 243 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 POMGNT1Q8WZA1 660 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 DNASE1L2Q92874 299 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 DHX58Q96C10 678 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 BORCS6Q96GS4 357 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 FGFBP2Q9BYJ0 223 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 SCAND2PQ9GZW5 306 aaPredicted RBP13.47□□□□□ -0.25
PRKDC-207ENST00000536483 BRD9Q9H8M2 597 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 ZFP14Q9HCL3 533 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 NCDNQ9UBB6 729 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 MRPS17Q9Y2R5 130 aaKnown RBP13.47□□□□□ -0.25
PRKDC-207ENST00000536483 PCDHGA2Q9Y5H1 932 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 INSL5Q9Y5Q6 135 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 CITO14578 2027 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 F5P12259 2224 aa13.47□□□□□ -0.25
PRKDC-207ENST00000536483 A0A1W2PQ27 194 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 A0A1W2PQ64 194 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 A0A1W2PQD8 194 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 ACTN4O43707 911 aaKnown RBP13.46□□□□□ -0.25
PRKDC-207ENST00000536483 MICAL2O94851 1124 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 MYL1P05976 194 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 TYMPP19971 482 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 MCM4P33991 863 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 RPS9P46781 194 aaKnown RBP13.46□□□□□ -0.25
PRKDC-207ENST00000536483 ACOT2P49753 483 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 LILRA4P59901 499 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 MTAPQ13126 283 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 BECN1Q14457 450 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 BMT2Q1RMZ1 405 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 FOXD4L6Q3SYB3 417 aaPredicted RBP13.46□□□□□ -0.25
PRKDC-207ENST00000536483 CYP4A22Q5TCH4 519 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 TPGS2Q68CL5 300 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 JADE1Q6IE81 842 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 IQCEQ6IPM2 695 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 FOXD4L3Q6VB84 417 aaPredicted RBP13.46□□□□□ -0.25
PRKDC-207ENST00000536483 ZBTB44Q8NCP5 570 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 BEST2Q8NFU1 509 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 ZSWIM3Q96MP5 696 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 ASB16Q96NS5 453 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 TRMT61BQ9BVS5 477 aaKnown RBP13.46□□□□□ -0.25
PRKDC-207ENST00000536483 IKZF4Q9H2S9 585 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 ZSCAN32Q9NX65 697 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 DLL3Q9NYJ7 618 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 TBC1D7Q9P0N9 293 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 CEP72Q9P209 647 aa13.46□□□□□ -0.25
PRKDC-207ENST00000536483 NDRG2Q9UN36 371 aaKnown RBP13.46□□□□□ -0.25
PRKDC-207ENST00000536483 PATJQ8NI35 1801 aa13.46□□□□□ -0.26
PRKDC-207ENST00000536483 UBE4BO95155 1302 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 NCOR2Q9Y618 2525 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 EXTL3O43909 919 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 LILRB5O75023 590 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 MOSPD3O75425 235 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 CYP11A1P05108 521 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 GJA1P17302 382 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 VIPR2P41587 438 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 SPAG1Q07617 926 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 TWF1Q12792 350 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 TMEM132DQ14C87 1099 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 RSPO4Q2I0M5 234 aaPredicted RBP13.45□□□□□ -0.26
PRKDC-207ENST00000536483 FAM26FQ5R3K3 315 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 C9orf57Q5W0N0 161 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 ZNF280DQ6N043 979 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 VITQ6UXI7 678 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 BRSK2Q8IWQ3 736 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 ZNF687Q8N1G0 1237 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 ELMOD1Q8N336 334 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 TMEM130Q8N3G9 435 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 CXorf38Q8TB03 319 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 NELL1Q92832 810 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 SMARCD2Q92925 531 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 SPATA32Q96LK8 384 aa13.45□□□□□ -0.26
PRKDC-207ENST00000536483 ZNF512Q96ME7 567 aaPredicted RBP13.45□□□□□ -0.26
PRKDC-207ENST00000536483 ZNF334Q9HCZ1 680 aaPredicted RBP13.45□□□□□ -0.26
PRKDC-207ENST00000536483 PRMT8Q9NR22 394 aaPredicted RBP13.45□□□□□ -0.26
PRKDC-207ENST00000536483 CGNQ9P2M7 1197 aaKnown RBP13.45□□□□□ -0.26
PRKDC-207ENST00000536483 AFF4Q9UHB7 1163 aaKnown RBP13.45□□□□□ -0.26
PRKDC-207ENST00000536483 PDCD11Q14690 1871 aaKnown RBP13.44□□□□□ -0.26
PRKDC-207ENST00000536483 MAN2B1O00754 1011 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 TGFB1I1O43294 461 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 KLRC4O43908 158 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 PRPF6O94906 941 aaKnown RBP13.44□□□□□ -0.26
PRKDC-207ENST00000536483 NFICP08651 508 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 MYL4P12829 197 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 CPB1P15086 417 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 PSMC3P17980 439 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 GDI1P31150 447 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 ASIC1P78348 528 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 RNF19BQ6ZMZ0 732 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 C12orf56Q8IXR9 622 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 EFCAB13Q8IY85 973 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 SYCP3Q8IZU3 236 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 GLIS3Q8NEA6 775 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 SCFD1Q8WVM8 642 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 IRF7Q92985 503 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 PAGE5Q96GU1 130 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 CBWD1Q9BRT8 395 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 EPC1Q9H2F5 836 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 KIAA1586Q9HCI6 787 aa13.44□□□□□ -0.26
PRKDC-207ENST00000536483 SMG5Q9UPR3 1016 aaKnown RBP13.44□□□□□ -0.26
PRKDC-207ENST00000536483 TIMM13Q9Y5L4 95 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms