RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 DNAJB7Q7Z6W7 309 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 GPIHBP1Q8IV16 184 aa14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 THEM5Q8N1Q8 247 aa14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 MYCT1Q8N699 235 aa14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 C12orf50Q8NA57 414 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 ATAD1Q8NBU5 361 aa14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 BPIFB1Q8TDL5 484 aa14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 DDX1Q92499 740 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SENP8Q96LD8 212 aa14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 DNAJC25Q9H1X3 360 aa14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 OBP2AQ9NY56 170 aa14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 DSEQ9UL01 958 aa14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 NCANO14594 1321 aa14.06□□□□□ -0.16
TNFRSF1A-207ENST00000535958 NPHP3-ACAD11A0A0J9YXS1 232 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TULP1O00294 542 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 PAPSS2O95340 614 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 ADRB1P08588 477 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TGM1P22735 817 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 MCM2P49736 904 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 CYP4F8P98187 520 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 DHX8Q14562 1220 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TMEM132DQ14C87 1099 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 ENOX2Q16206 610 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 IL17AQ16552 155 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SLC39A12Q504Y0 691 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 JADE1Q6IE81 842 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 GPBP1Q86WP2 473 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SYNPOQ8N3V7 929 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 EXOC4Q96A65 974 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 RSPRY1Q96DX4 576 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 CHAMP1Q96JM3 812 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 ZFYVE19Q96K21 471 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 PNMA5Q96PV4 448 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 LRRC3Q9BY71 257 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 CRISPLD1Q9H336 500 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 PARVGQ9HBI0 331 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 GTSE1Q9NYZ3 720 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 HSFX1Q9UBD0 423 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 ZMYM5Q9UJ78 669 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TBX20Q9UMR3 447 aa14.05□□□□□ -0.16
TNFRSF1A-207ENST00000535958 CACNA1BQ00975 2339 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SOAT2O75908 522 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 VNN2O95498 520 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 CCDC192P0DO97 292 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 AVPR1AP37288 418 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 UBA7P41226 1012 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 LILRA4P59901 499 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 AMPD2Q01433 879 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 DMWDQ09019 674 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 BFSP1Q12934 665 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SRSF5Q13243 272 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 GAS6Q14393 721 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 ZBTB6Q15916 424 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 ITPRIPL2Q3MIP1 535 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SPATA1Q5VX52 437 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 GAREM2Q75VX8 874 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TMEM130Q8N3G9 435 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 C2orf15Q8WU43 125 aaKnown RBP14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 AK8Q96MA6 479 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 LPIN3Q9BQK8 851 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 REEP2Q9BRK0 252 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 HAPLN2Q9GZV7 340 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TASP1Q9H6P5 420 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SPTBN2O15020 2390 aa14.04□□□□□ -0.16
TNFRSF1A-207ENST00000535958 K7ESF4 209 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 PPEF2O14830 753 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SLC26A4O43511 780 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 HRO43593 1189 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TRAK2O60296 914 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 ATG13O75143 517 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TAF6P49848 677 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SMARCB1Q12824 385 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 GRSF1Q12849 480 aaKnown RBP eCLIP14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TMEM119Q4V9L6 283 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 C9orf57Q5W0N0 161 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 ARL6IP4Q66PJ3 421 aaKnown RBP14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TXNDC11Q6PKC3 985 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 WDR5BQ86VZ2 330 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 FAM160A2Q8N612 972 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TTC9BQ8N6N2 239 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SPPL2BQ8TCT7 592 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TMEM209Q96SK2 561 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 PYM1Q9BRP8 204 aaKnown RBP14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 ABI2Q9NYB9 513 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 SLC8A2Q9UPR5 921 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 DERAQ9Y315 318 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 TSC2P49815 1807 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 RALGAPA1Q6GYQ0 2036 aa14.03□□□□□ -0.16
TNFRSF1A-207ENST00000535958 CYB561D2O14569 222 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 SEC24BO95487 1268 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PRAMEF12O95522 483 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PIGRP01833 764 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 NFICP08651 508 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TNK2Q07912 1038 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CCINQ13939 588 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ST3GAL2Q16842 350 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ADALQ6DHV7 355 aa14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CC2D1AQ6P1N0 951 aaPredicted RBP14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 DCP1BQ8IZD4 617 aaKnown RBP14.02□□□□□ -0.17
TNFRSF1A-207ENST00000535958 OR10T2Q8NGX3 314 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms