RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 POLR2BP30876 1174 aaKnown RBP6.94□□□□□ -1.3
CDCA3-205ENST00000535871 ASPAP45381 313 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 LHX1P48742 406 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 KLK7P49862 253 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 PDE6CP51160 858 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 LILRA4P59901 499 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 OSTNP61366 133 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 TNNC1P63316 161 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 CDR2Q01850 454 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 SMARCB1Q12824 385 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 RAPGEF1Q13905 1077 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 SPA17Q15506 151 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 UPP1Q16831 310 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 WDR72Q3MJ13 1102 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 SEZ6Q53EL9 994 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 PSRC1Q6PGN9 363 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-205ENST00000535871 ABI1Q8IZP0 508 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 CRYBG2Q8N1P7 616 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 DEPDC4Q8N2C3 294 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 RNF10Q8N5U6 811 aaKnown RBP6.94□□□□□ -1.3
CDCA3-205ENST00000535871 SLC30A5Q8TAD4 765 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 CPLX3Q8WVH0 158 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 LINC01599Q8WXQ3 324 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 TOP1MTQ969P6 601 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 TNIP3Q96KP6 325 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 GAD1Q99259 594 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 ZBED2Q9BTP6 218 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 MIS12Q9H081 205 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 LHX5Q9H2C1 402 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 MTIF3Q9H2K0 278 aaKnown RBP6.94□□□□□ -1.3
CDCA3-205ENST00000535871 HAUS4Q9H6D7 363 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 NHEJ1Q9H9Q4 299 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-205ENST00000535871 APOBEC3GQ9HC16 384 aaKnown RBP6.94□□□□□ -1.3
CDCA3-205ENST00000535871 IL23AQ9NPF7 189 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 NLRC4Q9NPP4 1024 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 CYLDQ9NQC7 956 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 CISHQ9NSE2 258 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 TMEM51Q9NW97 253 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 NENFQ9UMX5 172 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 AGAP1Q9UPQ3 857 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 HES2Q9Y543 173 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 NUB1Q9Y5A7 615 aa6.94□□□□□ -1.3
CDCA3-205ENST00000535871 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.94□□□□□ -1.3
CDCA3-205ENST00000535871 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.93□□□□□ -1.3
CDCA3-205ENST00000535871 TRIM43BA6NCK2 446 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 ESPNB1AK53 854 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 SYN3O14994 580 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 PJA2O43164 708 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 KRT86O43790 486 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 AKR1B10O60218 316 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 HUS1O60921 280 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 DGKIO75912 1065 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 C1RP00736 705 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 AMHP03971 560 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 KRT19P08727 400 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 MYBL1P10243 752 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 CYP11B1P15538 503 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 WARSP23381 471 aaKnown RBP6.93□□□□□ -1.3
CDCA3-205ENST00000535871 CDH5P33151 784 aaPredicted RBP6.93□□□□□ -1.3
CDCA3-205ENST00000535871 MLH1P40692 756 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 KIF11P52732 1056 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 HADHBP55084 474 aaKnown RBP6.93□□□□□ -1.3
CDCA3-205ENST00000535871 SNX16P57768 344 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 MAPRE1Q15691 268 aaKnown RBP6.93□□□□□ -1.3
CDCA3-205ENST00000535871 CNGA2Q16280 664 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 DESI1Q6ICB0 168 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 ARHGEF19Q8IW93 802 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 CMTR2Q8IYT2 770 aaKnown RBP6.93□□□□□ -1.3
CDCA3-205ENST00000535871 LRRC43Q8N309 656 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 APPL2Q8NEU8 664 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 PPP1R13LQ8WUF5 828 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 DDX1Q92499 740 aaKnown RBP6.93□□□□□ -1.3
CDCA3-205ENST00000535871 TRIM43Q96BQ3 446 aaPredicted RBP6.93□□□□□ -1.3
CDCA3-205ENST00000535871 VWCEQ96DN2 955 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 TRIM11Q96F44 468 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 SUSD3Q96L08 255 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 CEP295NLQ96MC4 621 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 ZFP42Q96MM3 310 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 NT5C1AQ9BXI3 368 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 ISCUQ9H1K1 167 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 DEF6Q9H4E7 631 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 RABGEF1Q9UJ41 708 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 NAGPAQ9UK23 515 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 NOCTQ9UK39 431 aaKnown RBP6.93□□□□□ -1.3
CDCA3-205ENST00000535871 LRFN2Q9ULH4 789 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 CEP83Q9Y592 693 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 TDRD15B5MCY1 1934 aaKnown RBP6.93□□□□□ -1.3
CDCA3-205ENST00000535871 SCN1AP35498 2009 aa6.93□□□□□ -1.3
CDCA3-205ENST00000535871 PODXLO00592 558 aa6.92□□□□□ -1.3
CDCA3-205ENST00000535871 RTN2O75298 545 aa6.92□□□□□ -1.3
CDCA3-205ENST00000535871 OAZ2O95190 189 aa6.92□□□□□ -1.3
CDCA3-205ENST00000535871 MYCP01106 439 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-205ENST00000535871 CYP1A1P04798 512 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-205ENST00000535871 ALDH2P05091 517 aa6.92□□□□□ -1.3
CDCA3-205ENST00000535871 SETSIPP0DME0 302 aa6.92□□□□□ -1.3
CDCA3-205ENST00000535871 VDRP11473 427 aa6.92□□□□□ -1.3
CDCA3-205ENST00000535871 ODC1P11926 461 aa6.92□□□□□ -1.3
CDCA3-205ENST00000535871 EN2P19622 333 aaPredicted RBP6.92□□□□□ -1.3
CDCA3-205ENST00000535871 PCSK1P29120 753 aa6.92□□□□□ -1.3
CDCA3-205ENST00000535871 CYP2C18P33260 490 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms