RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 HCFC2Q9Y5Z7 792 aa12.94□□□□□ -0.34
CHD4-203ENST00000535717 SPTBN5Q9NRC6 3674 aaKnown RBP12.93□□□□□ -0.34
CHD4-203ENST00000535717 NCK2O43639 380 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 N4BP1O75113 896 aaKnown RBP12.93□□□□□ -0.34
CHD4-203ENST00000535717 CLSTN1O94985 981 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 SPATA31D3P0C874 917 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 EPCAMP16422 314 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 LTBRP36941 435 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 ZNF165P49910 485 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 RAB33AQ14088 237 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 TCP11X2Q5H9J9 407 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 LILRA6Q6PI73 481 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 TMEM184AQ6ZMB5 413 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 SPATA31D4Q6ZUB0 917 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 PPFIBP1Q86W92 1011 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 DHX40Q8IX18 779 aaKnown RBP12.93□□□□□ -0.34
CHD4-203ENST00000535717 ADGRF2Q8IZF7 708 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 TMEM86AQ8N2M4 240 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 OR10T2Q8NGX3 314 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 PABPC5Q96DU9 382 aaKnown RBP12.93□□□□□ -0.34
CHD4-203ENST00000535717 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
CHD4-203ENST00000535717 TUBGCP2Q9BSJ2 902 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 OXCT2Q9BYC2 517 aaPredicted RBP12.93□□□□□ -0.34
CHD4-203ENST00000535717 IMPG2Q9BZV3 1241 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 SDCBP2Q9H190 292 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 HSD3B7Q9H2F3 369 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 SMYD3Q9H7B4 428 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 CLDND1Q9NY35 253 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 PLXNA3P51805 1871 aa12.93□□□□□ -0.34
CHD4-203ENST00000535717 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.92□□□□□ -0.34
CHD4-203ENST00000535717 FSD2A1L4K1 749 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 OR6C75A6NL08 312 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 GABRDO14764 452 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 P4HA2O15460 535 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 TGM5O43548 720 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 HCRTO43612 131 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 TBX10O75333 385 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 TACC1O75410 805 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 GLUD1P00367 558 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 C1RP00736 705 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 FAM163BP0C2L3 166 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 OR4Q2P0C623 313 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 WARSP23381 471 aaKnown RBP12.92□□□□□ -0.34
CHD4-203ENST00000535717 EEF1GP26641 437 aaKnown RBP12.92□□□□□ -0.34
CHD4-203ENST00000535717 ASPAP45381 313 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 RAP1GAPP47736 663 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 CDH8P55286 799 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 ARPP19P56211 112 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 NOP14P78316 857 aaKnown RBP12.92□□□□□ -0.34
CHD4-203ENST00000535717 ROR1Q01973 937 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 DLX2Q07687 328 aaPredicted RBP12.92□□□□□ -0.34
CHD4-203ENST00000535717 IQCB1Q15051 598 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 MAN2A1Q16706 1144 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 MIIPQ5JXC2 388 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 SCARA5Q6ZMJ2 495 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 EP400NLQ6ZTU2 488 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 THEM5Q8N1Q8 247 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 CCDC150Q8NCX0 1101 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 LMO3Q8TAP4 145 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 SPATA18Q8TC71 538 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 TMEM209Q96SK2 561 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 DDX43Q9NXZ2 648 aaKnown RBP12.92□□□□□ -0.34
CHD4-203ENST00000535717 CLEC1BQ9P126 229 aa12.92□□□□□ -0.34
CHD4-203ENST00000535717 BARX2Q9UMQ3 279 aaPredicted RBP12.92□□□□□ -0.34
CHD4-203ENST00000535717 WDR27A2RRH5 827 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 SMTNL1A8MU46 457 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 ABLIM3O94929 683 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 WEE2P0C1S8 567 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 P4HA1P13674 534 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 CPB1P15086 417 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 ZNF18P17022 549 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 ACAT1P24752 427 aaKnown RBP12.91□□□□□ -0.34
CHD4-203ENST00000535717 LMO2P25791 158 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 LHX1P48742 406 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 KRT31Q15323 416 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 VWA3BQ502W6 1294 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 WDR44Q5JSH3 913 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 LRRTM3Q86VH5 581 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 EHBP1Q8NDI1 1231 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 ZNF461Q8TAF7 563 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 CASP10Q92851 521 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 TATDN2Q93075 761 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 HLA-CQ95604 372 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 ACBD6Q9BR61 282 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 BCO2Q9BYV7 579 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 NIF3L1Q9GZT8 377 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 ZCWPW1Q9H0M4 648 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 NDST4Q9H3R1 872 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 UBE2ZQ9H832 354 aaPredicted RBP12.91□□□□□ -0.34
CHD4-203ENST00000535717 CBX8Q9HC52 389 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 TAB2Q9NYJ8 693 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 NME7Q9Y5B8 376 aa12.91□□□□□ -0.34
CHD4-203ENST00000535717 VNN2O95498 520 aa12.9□□□□□ -0.34
CHD4-203ENST00000535717 CAVIN2O95810 425 aa12.9□□□□□ -0.34
CHD4-203ENST00000535717 PDGFRBP09619 1106 aa12.9□□□□□ -0.34
CHD4-203ENST00000535717 GNL1P36915 607 aaPredicted RBP12.9□□□□□ -0.34
CHD4-203ENST00000535717 CETN1Q12798 172 aa12.9□□□□□ -0.34
CHD4-203ENST00000535717 LRMPQ12912 555 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms