RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 RPL13P26373 211 aaKnown RBP14.09□□□□□ -0.15
CHFR-210ENST00000535527 CA8P35219 290 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 PPP1R2P41236 205 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 RAP1GAPP47736 663 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 CLCN4P51793 760 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 MARSP56192 900 aaKnown RBP14.09□□□□□ -0.15
CHFR-210ENST00000535527 ADAM15Q13444 863 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 CBX2Q14781 532 aaPredicted RBP14.09□□□□□ -0.15
CHFR-210ENST00000535527 CLUL1Q15846 466 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 SOWAHAQ2M3V2 549 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 DCAF17Q5H9S7 520 aaPredicted RBP14.09□□□□□ -0.15
CHFR-210ENST00000535527 SYCE2Q6PIF2 218 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 SPATA31D4Q6ZUB0 917 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 FILIP1Q7Z7B0 1213 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 PDCL2Q8N4E4 241 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 TTC9BQ8N6N2 239 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 EFHBQ8N7U6 833 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 PPP2R3CQ969Q6 453 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 CNOT6LQ96LI5 555 aaKnown RBP14.09□□□□□ -0.15
CHFR-210ENST00000535527 LPIN3Q9BQK8 851 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 MRPL45Q9BRJ2 306 aaKnown RBP14.09□□□□□ -0.15
CHFR-210ENST00000535527 GTPBP4Q9BZE4 634 aaKnown RBP14.09□□□□□ -0.15
CHFR-210ENST00000535527 TLE6Q9H808 572 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 HMGXB4Q9UGU5 601 aa14.09□□□□□ -0.15
CHFR-210ENST00000535527 PUF60Q9UHX1 559 aaKnown RBP14.09□□□□□ -0.15
CHFR-210ENST00000535527 BICDL2A1A5D9 508 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 PROB1E7EW31 1015 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 NRG2O14511 850 aaPredicted RBP14.08□□□□□ -0.16
CHFR-210ENST00000535527 CYB561D2O14569 222 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 SYN3O14994 580 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 RBP5P82980 135 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 ROR1Q01973 937 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 SIGLEC14Q08ET2 396 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 NCOA4Q13772 614 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 STX1AQ16623 288 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 ANO6Q4KMQ2 910 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 LILRA6Q6PI73 481 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 C12orf76Q8N812 135 aaPredicted RBP14.08□□□□□ -0.16
CHFR-210ENST00000535527 HPDLQ96IR7 371 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 MSLNLQ96KJ4 702 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 PKMYT1Q99640 499 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 ARID3AQ99856 593 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 TMEM8AQ9HCN3 771 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 MRPL17Q9NRX2 175 aaKnown RBP14.08□□□□□ -0.16
CHFR-210ENST00000535527 TMLHEQ9NVH6 421 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 GDAP2Q9NXN4 497 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 SNX9Q9Y5X1 595 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 CDY1Q9Y6F8 540 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 MYH10P35580 1976 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 CACNA1HO95180 2353 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 MYO16Q9Y6X6 1858 aa14.08□□□□□ -0.16
CHFR-210ENST00000535527 CARNS1A5YM72 827 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 TGM5O43548 720 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 OAZ2O95190 189 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 SEC24AO95486 1093 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 STAU1O95793 577 aaKnown RBP14.07□□□□□ -0.16
CHFR-210ENST00000535527 ASS1P00966 412 aaKnown RBP14.07□□□□□ -0.16
CHFR-210ENST00000535527 TYMPP19971 482 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 ACAT1P24752 427 aaKnown RBP14.07□□□□□ -0.16
CHFR-210ENST00000535527 ERCC5P28715 1186 aaPredicted RBP14.07□□□□□ -0.16
CHFR-210ENST00000535527 OR1D2P34982 312 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 ASPAP45381 313 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 MXI1P50539 228 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 APBA1Q02410 837 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 ENPEPQ07075 957 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 ELAVL2Q12926 359 aaKnown RBP14.07□□□□□ -0.16
CHFR-210ENST00000535527 BIRC3Q13489 604 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 ZSCAN23Q3MJ62 389 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 SV2CQ496J9 727 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 MIIPQ5JXC2 388 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 CDKAL1Q5VV42 579 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 SLC8B1Q6J4K2 584 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 PDE12Q6L8Q7 609 aaKnown RBP14.07□□□□□ -0.16
CHFR-210ENST00000535527 DSTYKQ6XUX3 929 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 SCARA5Q6ZMJ2 495 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 FRMD5Q7Z6J6 570 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 LRRTM3Q86VH5 581 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 PALB2Q86YC2 1186 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 LMO3Q8TAP4 145 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 CACTINQ8WUQ7 758 aaKnown RBP14.07□□□□□ -0.16
CHFR-210ENST00000535527 ATOH1Q92858 354 aaPredicted RBP14.07□□□□□ -0.16
CHFR-210ENST00000535527 ZNF560Q96MR9 790 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 APOL5Q9BWW9 433 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 VRTNQ9H8Y1 702 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 FNIP2Q9P278 1114 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 ARMCX3Q9UH62 379 aaPredicted RBP14.07□□□□□ -0.16
CHFR-210ENST00000535527 FBXW11Q9UKB1 542 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 BACE2Q9Y5Z0 518 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 ANAPC1Q9H1A4 1944 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 SPTBN4Q9H254 2564 aa14.07□□□□□ -0.16
CHFR-210ENST00000535527 PTPRZ1P23471 2315 aaPredicted RBP14.06□□□□□ -0.16
CHFR-210ENST00000535527 GABRDO14764 452 aa14.06□□□□□ -0.16
CHFR-210ENST00000535527 IKBKBO14920 756 aa14.06□□□□□ -0.16
CHFR-210ENST00000535527 ATP2C2O75185 946 aa14.06□□□□□ -0.16
CHFR-210ENST00000535527 RFPL2O75678 378 aa14.06□□□□□ -0.16
CHFR-210ENST00000535527 WEE2P0C1S8 567 aa14.06□□□□□ -0.16
CHFR-210ENST00000535527 ODC1P11926 461 aa14.06□□□□□ -0.16
CHFR-210ENST00000535527 KRT13P13646 458 aa14.06□□□□□ -0.16
CHFR-210ENST00000535527 LMO2P25791 158 aa14.06□□□□□ -0.16
CHFR-210ENST00000535527 PIK3CAP42336 1068 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms