RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 MTMR1Q13613 665 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 ALCAMQ13740 583 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 RINLQ6ZS11 566 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 C3orf62Q6ZUJ4 267 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.13□□□□□ -0.152e-6■■■■■ 180.2
HDAC4-214ENST00000535493 FBXO27Q8NI29 283 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-214ENST00000535493 TEKT4Q8WW24 435 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 MAIP1Q8WWC4 291 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 INPP5DQ92835 1189 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 IDI2Q9BXS1 227 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 CCPG1Q9ULG6 757 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 COQ4Q9Y3A0 265 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 PCDHB4Q9Y5E5 795 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 WASF2Q9Y6W5 498 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 GREB1LQ9C091 1923 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-214ENST00000535493 CLUHO75153 1309 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 NVLO15381 856 aaKnown RBP14.13□□□□□ -0.15
HDAC4-214ENST00000535493 PRPF4O43172 522 aaKnown RBP eCLIP14.13□□□□□ -0.158e-7■■□□□ 12.1
HDAC4-214ENST00000535493 HARSP12081 509 aaKnown RBP14.13□□□□□ -0.15
HDAC4-214ENST00000535493 GLRA2P23416 452 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 CETN2P41208 172 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 SLC1A1P43005 524 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 KLC1Q07866 573 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 TKFCQ3LXA3 575 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 ZBTB41Q5SVQ8 909 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 RHPN2Q8IUC4 686 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 TTC17Q96AE7 1141 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 ZNF395Q9H8N7 513 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-214ENST00000535493 TCEAL9Q9UHQ7 104 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 MRPL11Q9Y3B7 192 aaKnown RBP14.13□□□□□ -0.15
HDAC4-214ENST00000535493 C2CD2Q9Y426 696 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 PCDHB2Q9Y5E7 798 aa14.13□□□□□ -0.15
HDAC4-214ENST00000535493 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.13□□□□□ -0.15
HDAC4-214ENST00000535493 TESPA1A2RU30 521 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-214ENST00000535493 GYG2O15488 501 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 ATP5HO75947 161 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 CCNE2O96020 404 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 MUTP22033 750 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 POLE2P56282 527 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 BRDTQ58F21 947 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-214ENST00000535493 ANO5Q75V66 913 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 C12orf56Q8IXR9 622 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 VTI1AQ96AJ9 217 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 ZBTB45Q96K62 511 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-214ENST00000535493 MCEEQ96PE7 176 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 RIT2Q99578 217 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 APOBEC3GQ9HC16 384 aaKnown RBP14.12□□□□□ -0.15
HDAC4-214ENST00000535493 PAPOLBQ9NRJ5 636 aaKnown RBP14.12□□□□□ -0.15
HDAC4-214ENST00000535493 SIPA1L1O43166 1804 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 SP100P23497 879 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-214ENST00000535493 GNA15P30679 374 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 OGDHQ02218 1023 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 DMP1Q13316 513 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-214ENST00000535493 BBS9Q3SYG4 887 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 DACT2Q5SW24 774 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 CCNJLQ8IV13 435 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 RBBP8NLQ8NC74 664 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-214ENST00000535493 CLPTM1LQ96KA5 538 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 SLITRK1Q96PX8 696 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 WDR83Q9BRX9 315 aaKnown RBP14.12□□□□□ -0.15
HDAC4-214ENST00000535493 AGO4Q9HCK5 861 aaKnown RBP14.12□□□□□ -0.15
HDAC4-214ENST00000535493 CYLDQ9NQC7 956 aa14.12□□□□□ -0.15
HDAC4-214ENST00000535493 A0A1B0GVG6 124 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 GSC2O15499 205 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 HLA-DRAP01903 254 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 UBTFL6P0CB48 400 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-214ENST00000535493 ZCCHC18P0CG32 403 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 RASSF2P50749 326 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 NCKAP1LP55160 1127 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 MTMR2Q13614 643 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 CYP4A22Q5TCH4 519 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 FYB2Q5VWT5 728 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 TDRD10Q5VZ19 366 aaKnown RBP14.11□□□□□ -0.15
HDAC4-214ENST00000535493 SLC30A9Q6PML9 568 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 ALYREFQ86V81 257 aaKnown RBP14.11□□□□□ -0.15
HDAC4-214ENST00000535493 VPS52Q8N1B4 723 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 ENDOVQ8N8Q3 282 aaKnown RBP14.11□□□□□ -0.15
HDAC4-214ENST00000535493 PYROXD1Q8WU10 500 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 MCUR1Q96AQ8 359 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 ZNF333Q96JL9 665 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 PAFAH2Q99487 392 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 DCLRE1BQ9H816 532 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 GINM1Q9NU53 330 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 PSMC3IPQ9P2W1 217 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-214ENST00000535493 RABGEF1Q9UJ41 708 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 BTAF1O14981 1849 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 SMAPO00193 183 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 C2CD2LO14523 706 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 ECE2O60344 883 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 AMPD1P23109 780 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 NLRP11P59045 1033 aaKnown RBP14.11□□□□□ -0.15
HDAC4-214ENST00000535493 PSMC5P62195 406 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 NOMO3P69849 1222 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 ZNF252P-AS1Q0IIN9 211 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 TSNAXIP1Q2TAA8 658 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 SLC45A4Q5BKX6 768 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 RNASEH2BQ5TBB1 312 aaKnown RBP14.11□□□□□ -0.15
HDAC4-214ENST00000535493 KATNAL2Q8IYT4 538 aa14.11□□□□□ -0.15
HDAC4-214ENST00000535493 OGFOD1Q8N543 542 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms