RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 PSMC3P17980 439 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 TUFMP49411 452 aaKnown RBP17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 AMPD3Q01432 767 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 HSCBQ8IWL3 235 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 BRSK2Q8IWQ3 736 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 NOC3LQ8WTT2 800 aaKnown RBP17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 DEPDC1BQ8WUY9 529 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 IRF7Q92985 503 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 SEPT5Q99719 369 aaPredicted RBP17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 ZCWPW1Q9H0M4 648 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 CUEDC2Q9H467 287 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 HEBP1Q9NRV9 189 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 MTF2Q9Y483 593 aaPredicted RBP17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 SCN1AP35498 2009 aa17.47■□□□□ 0.39
CLSTN3-204ENST00000535313 ANK1P16157 1881 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 CFAP54Q96N23 3096 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 A0A1W2PRU2 124 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 EXTL3O43909 919 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 PRPF6O94906 941 aaKnown RBP17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 YEATS4O95619 227 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 CD72P21854 359 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 GDI1P31150 447 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 VIPR2P41587 438 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 MAGEA9P43362 315 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 SMARCB1Q12824 385 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 VEPH1Q14D04 833 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 MGAT5BQ3V5L5 792 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 WSCD1Q658N2 575 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 ZC3H14Q6PJT7 736 aaKnown RBP17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 VITQ6UXI7 678 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 DNAJB7Q7Z6W7 309 aaPredicted RBP17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 TMC8Q8IU68 726 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 TTC9BQ8N6N2 239 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 FAM200AQ8TCP9 573 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 C2orf15Q8WU43 125 aaKnown RBP17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 PSMG2Q969U7 264 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 E2F7Q96AV8 911 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 CBWD1Q9BRT8 395 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 LRRC3Q9BY71 257 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 FGFBP2Q9BYJ0 223 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 SEMA4AQ9H3S1 761 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 TRPV4Q9HBA0 871 aa17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 SPATA6Q9NWH7 488 aaPredicted RBP17.46■□□□□ 0.39
CLSTN3-204ENST00000535313 GOLGA8IPA6NC78 632 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 GOLGA8JA6NMD2 632 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 MAN2B1O00754 1011 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 KIAA0391O15091 583 aaKnown RBP17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 CUTAO60888 179 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 SOAT2O75908 522 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 POLR2BP30876 1174 aaKnown RBP17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 TAF12Q16514 161 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 FOXD4L5Q5VV16 416 aaPredicted RBP17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 YAF2Q8IY57 180 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 DCP1BQ8IZD4 617 aaKnown RBP17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 IQUBQ8NA54 791 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 ZSWIM2Q8NEG5 633 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 KCNG4Q8TDN1 519 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 FOXD4L4Q8WXT5 416 aaPredicted RBP17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 DHX58Q96C10 678 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 BORCS6Q96GS4 357 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 ATXN3LQ9H3M9 355 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 PCIF1Q9H4Z3 704 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 KBTBD4Q9NVX7 518 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 AGAP1Q9UPQ3 857 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 MIA3Q5JRA6 1907 aa17.45■□□□□ 0.38
CLSTN3-204ENST00000535313 CACNA1IQ9P0X4 2223 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 HEPACAM2A8MVW5 462 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 ZNF263O14978 683 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 LAMTOR5O43504 91 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 ITGB3P05106 788 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 SP9P0CG40 484 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 TARSP26639 723 aaKnown RBP17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 WNT7BP56706 349 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 ASIC1P78348 528 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 TSPY1Q01534 308 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 E2F4Q16254 413 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 ARHGAP15Q53QZ3 475 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 MFSD6LQ8IWD5 586 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 GPD1LQ8N335 351 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 CSGALNACT2Q8N6G5 542 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 C1orf127Q8N9H9 656 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 SPPL2BQ8TCT7 592 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 TRIM9Q9C026 710 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 ZNF334Q9HCZ1 680 aaPredicted RBP17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 TRPV5Q9NQA5 729 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 ITGA11Q9UKX5 1188 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 R3HCC1Q9Y3T6 440 aaKnown RBP17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 R4GN57 208 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 F5P12259 2224 aa17.44■□□□□ 0.38
CLSTN3-204ENST00000535313 WDR87Q6ZQQ6 2873 aa17.43■□□□□ 0.38
CLSTN3-204ENST00000535313 COL4A3Q01955 1670 aa17.43■□□□□ 0.38
CLSTN3-204ENST00000535313 TSC2P49815 1807 aa17.43■□□□□ 0.38
CLSTN3-204ENST00000535313 HUS1O60921 280 aa17.43■□□□□ 0.38
CLSTN3-204ENST00000535313 KRT19P08727 400 aa17.43■□□□□ 0.38
CLSTN3-204ENST00000535313 TMEM191BP0C7N4 346 aa17.43■□□□□ 0.38
CLSTN3-204ENST00000535313 GABRR2P28476 465 aa17.43■□□□□ 0.38
CLSTN3-204ENST00000535313 CDR1P51861 262 aa17.43■□□□□ 0.38
CLSTN3-204ENST00000535313 RBP5P82980 135 aa17.43■□□□□ 0.38
CLSTN3-204ENST00000535313 FOXD4L6Q3SYB3 417 aaPredicted RBP17.43■□□□□ 0.38
CLSTN3-204ENST00000535313 FOXD4L3Q6VB84 417 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms