RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 EFHBQ8N7U6 833 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 LMO3Q8TAP4 145 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 TAF4BQ92750 862 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 TATDN2Q93075 761 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 PPP2R3CQ969Q6 453 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 MMS19Q96T76 1030 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 CDCA3Q99618 268 aaPredicted RBP14.08□□□□□ -0.16
TMEM258-202ENST00000535042 TUBGCP2Q9BSJ2 902 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 SMYD3Q9H7B4 428 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 CBX8Q9HC52 389 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 TAB2Q9NYJ8 693 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 DSEQ9UL01 958 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 HCFC2Q9Y5Z7 792 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 CDH23Q9H251 3354 aa14.08□□□□□ -0.16
TMEM258-202ENST00000535042 ARHGEF37A1IGU5 675 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 P4HA2O15460 535 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 TGM5O43548 720 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 N4BP1O75113 896 aaKnown RBP14.07□□□□□ -0.16
TMEM258-202ENST00000535042 ADH1AP07327 375 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 SPATA31D3P0C874 917 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 LMO2P25791 158 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 EEF1GP26641 437 aaKnown RBP14.07□□□□□ -0.16
TMEM258-202ENST00000535042 LTBRP36941 435 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 ASPAP45381 313 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 ARPP19P56211 112 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 TNNC1P63316 161 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 NOP14P78316 857 aaKnown RBP14.07□□□□□ -0.16
TMEM258-202ENST00000535042 ROR1Q01973 937 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 CREMQ03060 361 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 DLX2Q07687 328 aaPredicted RBP14.07□□□□□ -0.16
TMEM258-202ENST00000535042 KRT31Q15323 416 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 VWA3BQ502W6 1294 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 SCARA5Q6ZMJ2 495 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 SPATA31D4Q6ZUB0 917 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 METTL23Q86XA0 190 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 TMEM86AQ8N2M4 240 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 PRDM6Q9NQX0 595 aa14.07□□□□□ -0.16
TMEM258-202ENST00000535042 WDR27A2RRH5 827 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 OR6C75A6NL08 312 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 SMTNL1A8MU46 457 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 TBX10O75333 385 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 TACC1O75410 805 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 CLSTN1O94985 981 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 VNN2O95498 520 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 WEE2P0C1S8 567 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 ATP1A3P13637 1013 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 PRKCSHP14314 528 aaPredicted RBP14.06□□□□□ -0.16
TMEM258-202ENST00000535042 WARSP23381 471 aaKnown RBP14.06□□□□□ -0.16
TMEM258-202ENST00000535042 ACAT1P24752 427 aaKnown RBP14.06□□□□□ -0.16
TMEM258-202ENST00000535042 CDR1P51861 262 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 LRMPQ12912 555 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 SKIV2LQ15477 1246 aaKnown RBP14.06□□□□□ -0.16
TMEM258-202ENST00000535042 CCDC142Q17RM4 750 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 LRSAM1Q6UWE0 723 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 TMEM184AQ6ZMB5 413 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 APTXQ7Z2E3 356 aaKnown RBP14.06□□□□□ -0.16
TMEM258-202ENST00000535042 LUZP1Q86V48 1076 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 LRRTM3Q86VH5 581 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 EHBP1Q8NDI1 1231 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 FEZF2Q8TBJ5 459 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 PABPC5Q96DU9 382 aaKnown RBP14.06□□□□□ -0.16
TMEM258-202ENST00000535042 BCO2Q9BYV7 579 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 NDST4Q9H3R1 872 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 DDX43Q9NXZ2 648 aaKnown RBP14.06□□□□□ -0.16
TMEM258-202ENST00000535042 CLDND1Q9NY35 253 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 CLEC1BQ9P126 229 aa14.06□□□□□ -0.16
TMEM258-202ENST00000535042 LIMA1Q9UHB6 759 aaKnown RBP14.06□□□□□ -0.16
TMEM258-202ENST00000535042 BARX2Q9UMQ3 279 aaPredicted RBP14.06□□□□□ -0.16
TMEM258-202ENST00000535042 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.05□□□□□ -0.16
TMEM258-202ENST00000535042 ATP2C2O75185 946 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 ABLIM3O94929 683 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 GLUD1P00367 558 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 PDGFRBP09619 1106 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 FAM163BP0C2L3 166 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 ZNF445P59923 1031 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 RNF19BQ6ZMZ0 732 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 EP400NLQ6ZTU2 488 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 PPFIBP1Q86W92 1011 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 THEM5Q8N1Q8 247 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 OR6B3Q8NGW1 331 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 SPATA18Q8TC71 538 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 PKMYT1Q99640 499 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 ARID3AQ99856 593 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 LPIN3Q9BQK8 851 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 CRACR2AQ9BSW2 395 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 IMPG2Q9BZV3 1241 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 NIF3L1Q9GZT8 377 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 INTS2Q9H0H0 1204 aaKnown RBP14.05□□□□□ -0.16
TMEM258-202ENST00000535042 ZCWPW1Q9H0M4 648 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 VPS16Q9H269 839 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 TMLHEQ9NVH6 421 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 TSC2P49815 1807 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 TRANK1O15050 2925 aa14.05□□□□□ -0.16
TMEM258-202ENST00000535042 NCK2O43639 380 aa14.04□□□□□ -0.16
TMEM258-202ENST00000535042 SEC24AO95486 1093 aa14.04□□□□□ -0.16
TMEM258-202ENST00000535042 P4HA1P13674 534 aa14.04□□□□□ -0.16
TMEM258-202ENST00000535042 CPB1P15086 417 aa14.04□□□□□ -0.16
TMEM258-202ENST00000535042 SLC9A1P19634 815 aa14.04□□□□□ -0.16
TMEM258-202ENST00000535042 GNL1P36915 607 aaPredicted RBP14.04□□□□□ -0.16
TMEM258-202ENST00000535042 LHX1P48742 406 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms