RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 K7ESM1 405 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 EPHB6O15197 1021 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 TTLL1O95922 423 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 PRLRP16471 622 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 SEPHS1P49903 392 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 VAV2P52735 878 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 VSNL1P62760 191 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 RACK1P63244 317 aaKnown RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 ASIC1P78348 528 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 KRT83P78385 493 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 SPIRE1Q08AE8 756 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 SLC9A5Q14940 896 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CALCRLQ16602 461 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 MAN2A1Q16706 1144 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 DPY19L1Q2PZI1 675 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 ZXDCQ2QGD7 858 aaPredicted RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 GPATCH4Q5T3I0 446 aaKnown RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CDC42EP5Q6NZY7 148 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 DPP8Q6V1X1 898 aaPredicted RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CARFQ8N187 725 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 LRRC47Q8N1G4 583 aaKnown RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 SYN2Q92777 582 aaPredicted RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 HPS3Q969F9 1004 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CCDC47Q96A33 483 aaKnown RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 P2RX7Q99572 595 aaKnown RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 LRRC27Q9C0I9 530 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 NHEJ1Q9H9Q4 299 aaPredicted RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 ARHGAP20Q9P2F6 1191 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 MAGEC2Q9UBF1 373 aaPredicted RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 FBLN5Q9UBX5 448 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 SERPINB13Q9UIV8 391 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 BACE2Q9Y5Z0 518 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 SLX4Q8IY92 1834 aa6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 FRMPD2Q68DX3 1309 aaPredicted RBP6.5□□□□□ -1.37
TNFRSF1A-206ENST00000535038 RGPD3A6NKT7 1758 aaPredicted RBP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 RGPD4Q7Z3J3 1758 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CTAGE15A4D2H0 777 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 ZBTB5O15062 677 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 PPM1BO75688 479 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 NOL4O94818 638 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 ATP1A1P05023 1023 aaKnown RBP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CTAGE8P0CG41 777 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 OAS2P29728 719 aaKnown RBP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CYLC1P35663 651 aaPredicted RBP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 AARSP49588 968 aaKnown RBP eCLIP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 GJA9P57773 515 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 HDLBPQ00341 1268 aaKnown RBP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 SLC7A5Q01650 507 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 SMC1AQ14683 1233 aaKnown RBP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 TATDN1Q6P1N9 297 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 PDXDC1Q6P996 788 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 EPM2AIP1Q7L775 607 aaPredicted RBP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CTAGE6Q86UF2 777 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 TEX2Q8IWB9 1127 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 TRIM59Q8IWR1 403 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CTAGE4Q8IX94 777 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 MMGT1Q8N4V1 131 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 DCAF4Q8WV16 495 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 RUBCNQ92622 972 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 JAKMIP2Q96AA8 810 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 LENG9Q96B70 501 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 RPGRIP1Q96KN7 1286 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CCDC17Q96LX7 622 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 MMS19Q96T76 1030 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 NAP1L4Q99733 375 aaKnown RBP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 IDI2Q9BXS1 227 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 GLT8D2Q9H1C3 349 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 KCTD10Q9H3F6 313 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 NDST4Q9H3R1 872 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 VIPAS39Q9H9C1 493 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 VAT1LQ9HCJ6 419 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 SLC39A2Q9NP94 309 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 GINM1Q9NU53 330 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 NYAP2Q9P242 653 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 PUF60Q9UHX1 559 aaKnown RBP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 ZHX1Q9UKY1 873 aaPredicted RBP6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 NENFQ9UMX5 172 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 TFR2Q9UP52 801 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 ATP8B3O60423 1300 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 AFF2P51816 1311 aa6.49□□□□□ -1.37
TNFRSF1A-206ENST00000535038 ATRNL1Q5VV63 1379 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 C2orf71A6NGG8 1288 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 MEIS2O14770 477 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 TBX3O15119 743 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 KRT86O43790 486 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 TLR2O60603 784 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 ZBTB7AO95365 584 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 EPHX1P07099 455 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 PLEKP08567 350 aaPredicted RBP6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 ZBTB48P10074 688 aaPredicted RBP6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 NPR1P16066 1061 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 PAMP19021 973 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CIITAP33076 1130 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 CNR2P34972 360 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 MTIF2P46199 727 aaKnown RBP6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 MRPL12P52815 198 aaKnown RBP6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 SLC12A3P55017 1021 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 EIF6P56537 245 aaKnown RBP6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 COASYQ13057 564 aa6.48□□□□□ -1.37
TNFRSF1A-206ENST00000535038 UBE2SQ16763 222 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms