RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 GHRP10912 638 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 ITGA4P13612 1032 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 GLULP15104 373 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 ATF7P17544 494 aaPredicted RBP3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 AOC1P19801 751 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 TGM1P22735 817 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 VAMP1P23763 118 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 EDNRBP24530 442 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 ADD2P35612 726 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 STAT2P52630 851 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 CORO7P57737 925 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 ZNF445P59923 1031 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 PPP2R5DQ14738 602 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 ACAP1Q15027 740 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 TCEAL1Q15170 157 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 DGKDQ16760 1214 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 DUSP6Q16828 381 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 RUFY4Q6ZNE9 571 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 RNF207Q6ZRF8 634 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 UBALD2Q8IYN6 164 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 MAML2Q8IZL2 1156 aaPredicted RBP3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 GMCL1P1Q8NEA9 526 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 SMARCC2Q8TAQ2 1214 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 CHURC1Q8WUH1 139 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 RSAD2Q8WXG1 361 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 RUBCNQ92622 972 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 ATP6V0A1Q93050 837 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 ZBTB8AQ96BR9 441 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 MRRFQ96E11 262 aaKnown RBP3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 FCRL3Q96P31 734 aaPredicted RBP3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 STRBPQ96SI9 672 aaKnown RBP3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 HAUS7Q99871 368 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 AGO3Q9H9G7 860 aaKnown RBP3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 GP6Q9HCN6 339 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 IL17RBQ9NRM6 502 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 ADD3Q9UEY8 706 aaKnown RBP3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 DDX41Q9UJV9 622 aaKnown RBP3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 SORCS3Q9UPU3 1222 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 NOP58Q9Y2X3 529 aaKnown RBP3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 DMXL2Q8TDJ6 3036 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 FAM208BQ5VWN6 2430 aa3.48□□□□□ -1.85
CHMP4A-208ENST00000534106 ZBED9Q6R2W3 1325 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 EMSYQ7Z589 1322 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 ADGRA3Q8IWK6 1321 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 RAD50Q92878 1312 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 MCM3APO60318 1980 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 ASH1LQ9NR48 2969 aaKnown RBP3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 PTPRSQ13332 1948 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 SUV39H1O43463 412 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 NOBOXO60393 691 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 F2P00734 622 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 ITGB3P05106 788 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 ICAM1P05362 532 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 GOLGA8HP0CJ92 632 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 TSPY3P0CV98 308 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 TSPY8P0CW00 308 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 MYBP10242 640 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 TRIM27P14373 513 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 IFNGR1P15260 489 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 CD247P20963 164 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 PMLP29590 882 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 CD52P31358 61 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 PBX3P40426 434 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 RARSP54136 660 aaKnown RBP3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 PMS1P54277 932 aaKnown RBP3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 KCNC3Q14003 757 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 LPIN1Q14693 890 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 TTF1Q15361 905 aaPredicted RBP3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 LPAL2Q16609 132 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 CCDC96Q2M329 555 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 HSDL1Q3SXM5 330 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 USH1GQ495M9 461 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 RARS2Q5T160 578 aaKnown RBP3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 FAM102BQ5T8I3 360 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 PLPP4Q5VZY2 271 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 CPZQ66K79 652 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 B3GNT8Q7Z7M8 397 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 FAM160B2Q86V87 743 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 RPAP2Q8IXW5 612 aaPredicted RBP3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 TMEM57Q8N5G2 664 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 LZTR1Q8N653 840 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 FRAT1Q92837 279 aaPredicted RBP3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 RNF34Q969K3 372 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 OSBP2Q969R2 916 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 PEX11GQ96HA9 241 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 SPATA33Q96N06 139 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 C8orf49Q96NF6 230 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 NEK1Q96PY6 1258 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 FERD3LQ96RJ6 166 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 C16orf70Q9BSU1 422 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 LNPKQ9C0E8 428 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 UBA5Q9GZZ9 404 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 RANBP17Q9H2T7 1088 aaKnown RBP3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 TYW1Q9NV66 732 aaKnown RBP3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 PAG1Q9NWQ8 432 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 TMEM260Q9NX78 707 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 ADAMTS1Q9UHI8 967 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 CA14Q9ULX7 337 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 STX8Q9UNK0 236 aa3.47□□□□□ -1.85
CHMP4A-208ENST00000534106 RWDD3Q9Y3V2 267 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms