RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 PABPC1LQ4VXU2 614 aaKnown RBP14.37□□□□□ -0.11
CAPN1-227ENST00000533909 ADGRF2Q8IZF7 708 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 TOP6BLQ8N6T0 577 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 PARD3BQ8TEW8 1205 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-227ENST00000533909 ZNF512Q96ME7 567 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-227ENST00000533909 C1QTNF1Q9BXJ1 281 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 GDAP2Q9NXN4 497 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.37□□□□□ -0.11
CAPN1-227ENST00000533909 L1RE1Q9UN81 338 aa14.37□□□□□ -0.11
CAPN1-227ENST00000533909 BIN1O00499 593 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 MAPK13O15264 365 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 SEC24AO95486 1093 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 POU2F2P09086 479 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 EPB41P11171 864 aaKnown RBP14.36□□□□□ -0.11
CAPN1-227ENST00000533909 P4HA1P13674 534 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 PTPN2P17706 415 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 PCSK1P29120 753 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 ATICP31939 592 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 LHX1P48742 406 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 EPHB3P54753 998 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 TWF1Q12792 350 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 SMARCB1Q12824 385 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 DUSP4Q13115 394 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 TAF12Q16514 161 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 CAMK4Q16566 473 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 NFIL3Q16649 462 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 WDR72Q3MJ13 1102 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 CYP4A22Q5TCH4 519 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 KLHL10Q6JEL2 608 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 ZDHHC14Q8IZN3 488 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 OR10T2Q8NGX3 314 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 SPATA20Q8TB22 786 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 FEZF2Q8TBJ5 459 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 SPATA18Q8TC71 538 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 FAM200AQ8TCP9 573 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 TMC2Q8TDI7 906 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 BORCS6Q96GS4 357 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 SEPT5Q99719 369 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-227ENST00000533909 CORO1BQ9BR76 489 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 IMPG2Q9BZV3 1241 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 SNX25Q9H3E2 840 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 DDX43Q9NXZ2 648 aaKnown RBP14.36□□□□□ -0.11
CAPN1-227ENST00000533909 LIMD1Q9UGP4 676 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 MAN1B1Q9UKM7 699 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 YIPF1Q9Y548 306 aa14.36□□□□□ -0.11
CAPN1-227ENST00000533909 MTMR11A4FU01 709 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 IKBKBO14920 756 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 STX10O60499 249 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 AKAP3O75969 853 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 PIK3CAP42336 1068 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 TUFMP49411 452 aaKnown RBP14.35□□□□□ -0.11
CAPN1-227ENST00000533909 MYL6P60660 151 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 NTHL1P78549 312 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 LRRC63Q05C16 580 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 NCOA4Q13772 614 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 VEPH1Q14D04 833 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 NFE2Q16621 373 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-227ENST00000533909 ZNF699Q32M78 642 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 COBLL1Q53SF7 1204 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 TDRD10Q5VZ19 366 aaKnown RBP14.35□□□□□ -0.11
CAPN1-227ENST00000533909 DPH6Q7L8W6 267 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 ADSSL1Q8N142 457 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 ATAD1Q8NBU5 361 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 CCDC150Q8NCX0 1101 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 CXorf38Q8TB03 319 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 C2orf15Q8WU43 125 aaKnown RBP14.35□□□□□ -0.11
CAPN1-227ENST00000533909 ZNF516Q92618 1163 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 EEF2KMTQ96G04 330 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 DHTKD1Q96HY7 919 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-227ENST00000533909 TMEM209Q96SK2 561 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 ZCWPW1Q9H0M4 648 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 MMRN2Q9H8L6 949 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 ASAH2Q9NR71 780 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 HCFC1R1Q9NWW0 138 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 ABI2Q9NYB9 513 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-227ENST00000533909 NXF1Q9UBU9 619 aaKnown RBP14.35□□□□□ -0.11
CAPN1-227ENST00000533909 SLC27A5Q9Y2P5 690 aa14.35□□□□□ -0.11
CAPN1-227ENST00000533909 MRPS23Q9Y3D9 190 aaKnown RBP14.35□□□□□ -0.11
CAPN1-227ENST00000533909 C2orf16Q68DN1 1984 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 ZNF197O14709 1029 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 PAPLNO95428 1278 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 CST3P01034 146 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-227ENST00000533909 ACAT1P24752 427 aaKnown RBP14.34□□□□□ -0.11
CAPN1-227ENST00000533909 CDR1P51861 262 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 DLG4P78352 724 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 CLDN10P78369 228 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 FKBP3Q00688 224 aaKnown RBP14.34□□□□□ -0.11
CAPN1-227ENST00000533909 MTMR3Q13615 1198 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 PTPN21Q16825 1174 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 SOWAHAQ2M3V2 549 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 MGAT5BQ3V5L5 792 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 ZCWPW2Q504Y3 356 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 ZNF667Q5HYK9 610 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 CENPPQ6IPU0 288 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 PDZD4Q76G19 769 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-227ENST00000533909 ITIH5Q86UX2 942 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 SPPL2BQ8TCT7 592 aa14.34□□□□□ -0.11
CAPN1-227ENST00000533909 PLEKHO2Q8TD55 490 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms