RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 ZNF334Q9HCZ1 680 aaPredicted RBP18.82■□□□□ 0.6
VPS51-213ENST00000533827 TRPV5Q9NQA5 729 aa18.82■□□□□ 0.6
VPS51-213ENST00000533827 TCHHQ07283 1943 aa18.82■□□□□ 0.6
VPS51-213ENST00000533827 NCANO14594 1321 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 KPNA7A9QM74 516 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 SPTLC2O15270 562 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 SOAT2O75908 522 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 TARSP26639 723 aaKnown RBP18.81■□□□□ 0.6
VPS51-213ENST00000533827 FZD5Q13467 585 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 E2F4Q16254 413 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 SV2CQ496J9 727 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 SLC39A12Q504Y0 691 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 WSCD1Q658N2 575 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 SYCP3Q8IZU3 236 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 THEM5Q8N1Q8 247 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 IRF7Q92985 503 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 CLDN23Q96B33 292 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 CBWD1Q9BRT8 395 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 TNMDQ9H2S6 317 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 SEMA4AQ9H3S1 761 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 TMEM206Q9H813 350 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 KBTBD4Q9NVX7 518 aa18.81■□□□□ 0.6
VPS51-213ENST00000533827 TFIP11Q9UBB9 837 aaKnown RBP18.81■□□□□ 0.6
VPS51-213ENST00000533827 PRPF6O94906 941 aaKnown RBP18.8■□□□□ 0.6
VPS51-213ENST00000533827 GDI1P31150 447 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 PNPLA4P41247 253 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 MAGEA9P43362 315 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 TUFMP49411 452 aaKnown RBP18.8■□□□□ 0.6
VPS51-213ENST00000533827 ZNF852Q6ZMS4 543 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 GAREM2Q75VX8 874 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 LRRTM3Q86VH5 581 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 MFSD6LQ8IWD5 586 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 CCDC65Q8IXS2 484 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 CXorf38Q8TB03 319 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 E2F7Q96AV8 911 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 ZNF560Q96MR9 790 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 ZNF396Q96N95 335 aaPredicted RBP18.8■□□□□ 0.6
VPS51-213ENST00000533827 MKNK1Q9BUB5 465 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 RBAKQ9NYW8 714 aaPredicted RBP18.8■□□□□ 0.6
VPS51-213ENST00000533827 R4GN57 208 aa18.8■□□□□ 0.6
VPS51-213ENST00000533827 GOLGA8IPA6NC78 632 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 GOLGA8JA6NMD2 632 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 HEPACAM2A8MVW5 462 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 EXTL3O43909 919 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 YEATS4O95619 227 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 ITGB3P05106 788 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 ATF6P18850 670 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 RPS9P46781 194 aaKnown RBP18.79■□□□□ 0.6
VPS51-213ENST00000533827 TFAMQ00059 246 aaKnown RBP18.79■□□□□ 0.6
VPS51-213ENST00000533827 SMARCB1Q12824 385 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 MGAT5BQ3V5L5 792 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 STXBP5Q5T5C0 1151 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 ITIH5Q86UX2 942 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 ADSSL1Q8N142 457 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 ZNF687Q8N1G0 1237 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 C1orf127Q8N9H9 656 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 SPPL2BQ8TCT7 592 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 C2orf15Q8WU43 125 aaKnown RBP18.79■□□□□ 0.6
VPS51-213ENST00000533827 CACTINQ8WUQ7 758 aaKnown RBP18.79■□□□□ 0.6
VPS51-213ENST00000533827 RSPRY1Q96DX4 576 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 LPIN3Q9BQK8 851 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 LRRC27Q9C0I9 530 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 CUEDC2Q9H467 287 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 PCIF1Q9H4Z3 704 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 SLITRK6Q9H5Y7 841 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 SPATA6Q9NWH7 488 aaPredicted RBP18.79■□□□□ 0.6
VPS51-213ENST00000533827 MRPS17Q9Y2R5 130 aaKnown RBP18.79■□□□□ 0.6
VPS51-213ENST00000533827 FANCMQ8IYD8 2048 aa18.79■□□□□ 0.6
VPS51-213ENST00000533827 TICRRQ7Z2Z1 1910 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 ARNTLO00327 626 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 MAN2B1O00754 1011 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 NCAM2O15394 837 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 FGF19O95750 216 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 GABRR2P28476 465 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 POLR2BP30876 1174 aaKnown RBP18.78■□□□□ 0.6
VPS51-213ENST00000533827 CDR1P51861 262 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 ZNF528Q3MIS6 628 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 SCARA3Q6AZY7 606 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 SHC4Q6S5L8 630 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 GPD1LQ8N335 351 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 GLIS3Q8NEA6 775 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 SEPT5Q99719 369 aaPredicted RBP18.78■□□□□ 0.6
VPS51-213ENST00000533827 TRIM9Q9C026 710 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 ATXN3LQ9H3M9 355 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 FBXO4Q9UKT5 387 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 AGAP1Q9UPQ3 857 aa18.78■□□□□ 0.6
VPS51-213ENST00000533827 ZNF263O14978 683 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 KIAA0391O15091 583 aaKnown RBP18.77■□□□□ 0.6
VPS51-213ENST00000533827 LAMTOR5O43504 91 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 CUTAO60888 179 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 LMNAP02545 664 aaKnown RBP18.77■□□□□ 0.6
VPS51-213ENST00000533827 HAPLN1P10915 354 aaPredicted RBP18.77■□□□□ 0.6
VPS51-213ENST00000533827 FCHO2Q0JRZ9 810 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 ZC3H14Q6PJT7 736 aaKnown RBP18.77■□□□□ 0.6
VPS51-213ENST00000533827 ARID3BQ8IVW6 561 aaPredicted RBP18.77■□□□□ 0.6
VPS51-213ENST00000533827 DCP1BQ8IZD4 617 aaKnown RBP18.77■□□□□ 0.6
VPS51-213ENST00000533827 PDCL2Q8N4E4 241 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 LRRC52Q8N7C0 313 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 FAM200AQ8TCP9 573 aa18.77■□□□□ 0.6
VPS51-213ENST00000533827 HPS3Q969F9 1004 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms