RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 MMS19Q96T76 1030 aa23.36■■□□□ 1.33
VPS51-212ENST00000533656 EMILIN2Q9BXX0 1053 aa23.36■■□□□ 1.33
VPS51-212ENST00000533656 CYP3A43Q9HB55 503 aa23.36■■□□□ 1.33
VPS51-212ENST00000533656 RXFP1Q9HBX9 757 aa23.36■■□□□ 1.33
VPS51-212ENST00000533656 FNIP2Q9P278 1114 aa23.36■■□□□ 1.33
VPS51-212ENST00000533656 NXF1Q9UBU9 619 aaKnown RBP23.36■■□□□ 1.33
VPS51-212ENST00000533656 L1RE1Q9UN81 338 aa23.36■■□□□ 1.33
VPS51-212ENST00000533656 BACE2Q9Y5Z0 518 aa23.36■■□□□ 1.33
VPS51-212ENST00000533656 FSD2A1L4K1 749 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 LILRB3O75022 631 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 CXCL14O95715 111 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 SERPINC1P01008 464 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 TBXAS1P24557 533 aaPredicted RBP23.35■■□□□ 1.33
VPS51-212ENST00000533656 LHX1P48742 406 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 PSMD5Q16401 504 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 PLPP4Q5VZY2 271 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 OVOS1Q6IE37 1185 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 ADGRF2Q8IZF7 708 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 THEM5Q8N1Q8 247 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 PDCL2Q8N4E4 241 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 RNF214Q8ND24 703 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 LMO3Q8TAP4 145 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 LNX1Q8TBB1 728 aaPredicted RBP23.35■■□□□ 1.33
VPS51-212ENST00000533656 PI4K2AQ9BTU6 479 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 INTS2Q9H0H0 1204 aaKnown RBP23.35■■□□□ 1.33
VPS51-212ENST00000533656 APOBEC3GQ9HC16 384 aaKnown RBP23.35■■□□□ 1.33
VPS51-212ENST00000533656 MTRRQ9UBK8 725 aa23.35■■□□□ 1.33
VPS51-212ENST00000533656 PLXNA4Q9HCM2 1894 aa23.34■■□□□ 1.33
VPS51-212ENST00000533656 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.34■■□□□ 1.33
VPS51-212ENST00000533656 OR6C75A6NL08 312 aa23.34■■□□□ 1.33
VPS51-212ENST00000533656 SOWAHAQ2M3V2 549 aa23.34■■□□□ 1.33
VPS51-212ENST00000533656 WSCD1Q658N2 575 aa23.34■■□□□ 1.33
VPS51-212ENST00000533656 BCO2Q9BYV7 579 aa23.34■■□□□ 1.33
VPS51-212ENST00000533656 SCN1AP35498 2009 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 MYO7AQ13402 2215 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 C2orf71A6NGG8 1288 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 C1RP00736 705 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 WARSP23381 471 aaKnown RBP23.33■■□□□ 1.33
VPS51-212ENST00000533656 ASPAP45381 313 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 YWHAEP62258 255 aaKnown RBP23.33■■□□□ 1.33
VPS51-212ENST00000533656 SPOPLQ6IQ16 392 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 TRIM65Q6PJ69 517 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 ENOSF1Q7L5Y1 443 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 B3GALT6Q96L58 329 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 CDCA3Q99618 268 aaPredicted RBP23.33■■□□□ 1.33
VPS51-212ENST00000533656 DNAI2Q9GZS0 605 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 NSUN3Q9H649 340 aaKnown RBP23.33■■□□□ 1.33
VPS51-212ENST00000533656 DAAM1Q9Y4D1 1078 aa23.33■■□□□ 1.33
VPS51-212ENST00000533656 A0A1B0GTH6 734 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 C2CD2LO14523 706 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 GABRDO14764 452 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 TPM3P06753 285 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 ADH1AP07327 375 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 RFX1P22670 979 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 PCSK1P29120 753 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 CA8P35219 290 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 IRS1P35568 1242 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 NDUFV1P49821 464 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 FANCCQ00597 558 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 GCNT1Q02742 428 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 UBXN1Q04323 297 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 CTXN3Q4LDR2 81 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 CRACR2AQ9BSW2 395 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 RTN4Q9NQC3 1192 aaKnown RBP23.32■■□□□ 1.32
VPS51-212ENST00000533656 POLIQ9UNA4 740 aa23.32■■□□□ 1.32
VPS51-212ENST00000533656 TIMM13Q9Y5L4 95 aaPredicted RBP23.32■■□□□ 1.32
VPS51-212ENST00000533656 TBC1D4O60343 1298 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 TRIM21P19474 475 aaKnown RBP23.31■■□□□ 1.32
VPS51-212ENST00000533656 PON1P27169 355 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 CUL2Q13617 745 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 SLC8B1Q6J4K2 584 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 PRSS55Q6UWB4 352 aaPredicted RBP23.31■■□□□ 1.32
VPS51-212ENST00000533656 SCARA5Q6ZMJ2 495 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 PPFIBP1Q86W92 1011 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 KBTBD7Q8WVZ9 684 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 JAKMIP2Q96AA8 810 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 ERGIC2Q96RQ1 377 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 ACBD6Q9BR61 282 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 SNX25Q9H3E2 840 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 SMYD3Q9H7B4 428 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 APEX2Q9UBZ4 518 aa23.31■■□□□ 1.32
VPS51-212ENST00000533656 HIDE1A8MVS5 230 aa23.3■■□□□ 1.32
VPS51-212ENST00000533656 LRRN2O75325 713 aa23.3■■□□□ 1.32
VPS51-212ENST00000533656 INCA1Q0VD86 236 aa23.3■■□□□ 1.32
VPS51-212ENST00000533656 UNC93AQ86WB7 457 aa23.3■■□□□ 1.32
VPS51-212ENST00000533656 PPM1KQ8N3J5 372 aa23.3■■□□□ 1.32
VPS51-212ENST00000533656 AUTS2Q8WXX7 1259 aa23.3■■□□□ 1.32
VPS51-212ENST00000533656 HLA-CQ95604 372 aa23.3■■□□□ 1.32
VPS51-212ENST00000533656 PLCB1Q9NQ66 1216 aa23.3■■□□□ 1.32
VPS51-212ENST00000533656 DDX43Q9NXZ2 648 aaKnown RBP23.3■■□□□ 1.32
VPS51-212ENST00000533656 FBXL5Q9UKA1 691 aa23.3■■□□□ 1.32
VPS51-212ENST00000533656 COG5Q9UP83 839 aa23.3■■□□□ 1.32
VPS51-212ENST00000533656 TEX28O15482 410 aa23.29■■□□□ 1.32
VPS51-212ENST00000533656 CBFA2T2O43439 604 aa23.29■■□□□ 1.32
VPS51-212ENST00000533656 CNPP09543 421 aaKnown RBP23.29■■□□□ 1.32
VPS51-212ENST00000533656 SLC9A1P19634 815 aa23.29■■□□□ 1.32
VPS51-212ENST00000533656 GNL1P36915 607 aaPredicted RBP23.29■■□□□ 1.32
VPS51-212ENST00000533656 UBASH3AP57075 661 aa23.29■■□□□ 1.32
VPS51-212ENST00000533656 TSPY1Q01534 308 aa23.29■■□□□ 1.32
VPS51-212ENST00000533656 SMARCB1Q12824 385 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms