RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 KIAA0319Q5VV43 1072 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 OVOS1Q6IE37 1185 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 METTL23Q86XA0 190 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 CEP57Q86XR8 500 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 SPATA18Q8TC71 538 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 WHAMMQ8TF30 809 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 ARNTL2Q8WYA1 636 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 SHC3Q92529 594 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 JAKMIP2Q96AA8 810 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 RTP3Q9BQQ7 232 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 STK33Q9BYT3 514 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 ZBP1Q9H171 429 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 SNX25Q9H3E2 840 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 NLRC4Q9NPP4 1024 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 CISHQ9NSE2 258 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 CEP72Q9P209 647 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 STK39Q9UEW8 545 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 PUF60Q9UHX1 559 aaKnown RBP12.74□□□□□ -0.37
COMMD9-208ENST00000533643 DAAM1Q9Y4D1 1078 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 NME7Q9Y5B8 376 aa12.74□□□□□ -0.37
COMMD9-208ENST00000533643 TRIOBPQ9H2D6 2365 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 FOXN3O00409 490 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 SOX1O00570 391 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 TBC1D4O60343 1298 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 CDC25BP30305 580 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 LHX1P48742 406 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 JAM2P57087 298 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 YWHAEP62258 255 aaKnown RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 DSG1Q02413 1049 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 YWHAHQ04917 246 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 UBE3AQ05086 875 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 GPM6BQ13491 265 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 RAPGEF1Q13905 1077 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 DRAP1Q14919 205 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 PRSS55Q6UWB4 352 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 TMC6Q7Z403 805 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 LNX1Q8TBB1 728 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 AUTS2Q8WXX7 1259 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 RIN2Q8WYP3 895 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 BAP1Q92560 729 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 EDEM3Q9BZQ6 932 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 GPR88Q9GZN0 384 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 FAM124BQ9H5Z6 455 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 HMGXB4Q9UGU5 601 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 BARX2Q9UMQ3 279 aaPredicted RBP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 CNTN6Q9UQ52 1028 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
COMMD9-208ENST00000533643 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.73□□□□□ -0.37
COMMD9-208ENST00000533643 A0A1W2PQJ5 194 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 LILRB3O75022 631 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 CILPO75339 1184 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 GYPCP04921 128 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 PDGFRBP09619 1106 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 PNMA6AP0CW24 399 aaPredicted RBP12.72□□□□□ -0.37
COMMD9-208ENST00000533643 CTSAP10619 480 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 GLUD2P49448 558 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 ZNF132P52740 706 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 NDST1P52848 882 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 ERVFC1P60507 584 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 ORC1Q13415 861 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 CAMK1Q14012 370 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 KIAA1841Q6NSI8 718 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 ANKS3Q6ZW76 656 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 UNC93AQ86WB7 457 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 GPR65Q8IYL9 337 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 TTC39CQ8N584 583 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 OR6B3Q8NGW1 331 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 POF1BQ8WVV4 589 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 PIK3R5Q8WYR1 880 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 TWNKQ96RR1 684 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 ELOVL4Q9GZR5 314 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 ZNF576Q9H609 170 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
COMMD9-208ENST00000533643 CAPN11Q9UMQ6 739 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 STXBP5LQ9Y2K9 1186 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 NLRC5Q86WI3 1866 aa12.72□□□□□ -0.37
COMMD9-208ENST00000533643 A8MXQ7 604 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 F8VZ95 297 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 H7C4K7 107 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 RFXAPO00287 272 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 C2CD2LO14523 706 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 FSCN2O14926 492 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 CXCL14O95715 111 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 URODP06132 367 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 KRT5P13647 590 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 RPL17P18621 184 aaKnown RBP12.71□□□□□ -0.37
COMMD9-208ENST00000533643 ACAT1P24752 427 aaKnown RBP12.71□□□□□ -0.37
COMMD9-208ENST00000533643 CASP14P31944 242 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.37
COMMD9-208ENST00000533643 RAD23BP54727 409 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 TRIM14Q14142 442 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 PTPN14Q15678 1187 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 PSMD5Q16401 504 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 CTXN3Q4LDR2 81 aa12.71□□□□□ -0.37
COMMD9-208ENST00000533643 ZNF280DQ6N043 979 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms