RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 PDILTQ8N807 584 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 ATAD1Q8NBU5 361 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 ZSWIM2Q8NEG5 633 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 OR10T2Q8NGX3 314 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 SHKBP1Q8TBC3 707 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 GBP4Q96PP9 640 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 ZCWPW1Q9H0M4 648 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 TRPV4Q9HBA0 871 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 LTB4R2Q9NPC1 389 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 PANK4Q9NVE7 773 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 DSEQ9UL01 958 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 CFAP45Q9UL16 551 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 SLC27A5Q9Y2P5 690 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 MTF2Q9Y483 593 aaPredicted RBP12.22□□□□□ -0.45
CLCF1-202ENST00000533438 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
CLCF1-202ENST00000533438 KIF26AQ9ULI4 1882 aaPredicted RBP12.21□□□□□ -0.45
CLCF1-202ENST00000533438 CYB561D2O14569 222 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 SPTLC2O15270 562 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 LDHAP00338 332 aaKnown RBP12.21□□□□□ -0.45
CLCF1-202ENST00000533438 MYL4P12829 197 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 EPHB3P54753 998 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 GRM2Q14416 872 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 STK38Q15208 465 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 TEAD2Q15562 447 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 FOXD4L6Q3SYB3 417 aaPredicted RBP12.21□□□□□ -0.45
CLCF1-202ENST00000533438 ARMCX5Q6P1M9 558 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 VITQ6UXI7 678 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 FOXD4L3Q6VB84 417 aaPredicted RBP12.21□□□□□ -0.45
CLCF1-202ENST00000533438 TPRG1Q6ZUI0 275 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 C1orf210Q8IVY1 113 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 MAML2Q8IZL2 1156 aaPredicted RBP12.21□□□□□ -0.45
CLCF1-202ENST00000533438 CXorf38Q8TB03 319 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 DNASE1L2Q92874 299 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 SMARCD2Q92925 531 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 PSMG2Q969U7 264 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 SAAL1Q96ER3 474 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 PYM1Q9BRP8 204 aaKnown RBP12.21□□□□□ -0.45
CLCF1-202ENST00000533438 FAM213AQ9BRX8 229 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 GPR88Q9GZN0 384 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 TNMDQ9H2S6 317 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 TRPV5Q9NQA5 729 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 HEBP1Q9NRV9 189 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 KBTBD4Q9NVX7 518 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 DLL3Q9NYJ7 618 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 ASB3Q9Y575 518 aa12.21□□□□□ -0.45
CLCF1-202ENST00000533438 A0A1W2PRU2 124 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 FAM170BA6NMN3 283 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 KPNA7A9QM74 516 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 SOAT2O75908 522 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 YEATS4O95619 227 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 PSMC3P17980 439 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 CD72P21854 359 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 TARSP26639 723 aaKnown RBP12.2□□□□□ -0.46
CLCF1-202ENST00000533438 ALDH1A3P47895 512 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 UBXN2BQ14CS0 331 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 SV2CQ496J9 727 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 SLC39A12Q504Y0 691 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 WSCD1Q658N2 575 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 GAREM2Q75VX8 874 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 CCDC65Q8IXS2 484 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 C1orf127Q8N9H9 656 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 ZSCAN18Q8TBC5 510 aaPredicted RBP12.2□□□□□ -0.46
CLCF1-202ENST00000533438 DEPDC1BQ8WUY9 529 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 CLDN23Q96B33 292 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 RMDN1Q96DB5 314 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 CHAMP1Q96JM3 812 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 ZNF560Q96MR9 790 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 CBWD1Q9BRT8 395 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 MKNK1Q9BUB5 465 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 TRMT61BQ9BVS5 477 aaKnown RBP12.2□□□□□ -0.46
CLCF1-202ENST00000533438 TRIM9Q9C026 710 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 SCAND2PQ9GZW5 306 aaPredicted RBP12.2□□□□□ -0.46
CLCF1-202ENST00000533438 CUEDC2Q9H467 287 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 TMEM206Q9H813 350 aa12.2□□□□□ -0.46
CLCF1-202ENST00000533438 ZNF334Q9HCZ1 680 aaPredicted RBP12.2□□□□□ -0.46
CLCF1-202ENST00000533438 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
CLCF1-202ENST00000533438 EP300Q09472 2414 aaPredicted RBP12.19□□□□□ -0.46
CLCF1-202ENST00000533438 ARNTLO00327 626 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 CUTAO60888 179 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 PRPF6O94906 941 aaKnown RBP12.19□□□□□ -0.46
CLCF1-202ENST00000533438 ITGB3P05106 788 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 SP9P0CG40 484 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 ATF6P18850 670 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 PNPLA4P41247 253 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 VIPR2P41587 438 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 MAGEA9P43362 315 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 TUFMP49411 452 aaKnown RBP12.19□□□□□ -0.46
CLCF1-202ENST00000533438 SMARCB1Q12824 385 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 FZD5Q13467 585 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 PUM1Q14671 1186 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLCF1-202ENST00000533438 STXBP5Q5T5C0 1151 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 SCARA3Q6AZY7 606 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 CNNM4Q6P4Q7 775 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 SHC4Q6S5L8 630 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 ZNF852Q6ZMS4 543 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 DNAJB7Q7Z6W7 309 aaPredicted RBP12.19□□□□□ -0.46
CLCF1-202ENST00000533438 LRRTM3Q86VH5 581 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 METTL23Q86XA0 190 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 MFSD6LQ8IWD5 586 aa12.19□□□□□ -0.46
CLCF1-202ENST00000533438 SYCP3Q8IZU3 236 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms