RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ELF1P32519 619 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 PSMC2P35998 433 aaKnown RBP21.97■■□□□ 1.11
CCS-208ENST00000533244 PPP1R2P41236 205 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 PMS1P54277 932 aaKnown RBP21.97■■□□□ 1.11
CCS-208ENST00000533244 ADCY1Q08828 1119 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 SOWAHAQ2M3V2 549 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 TDRD10Q5VZ19 366 aaKnown RBP21.97■■□□□ 1.11
CCS-208ENST00000533244 INTS8Q75QN2 995 aaKnown RBP21.97■■□□□ 1.11
CCS-208ENST00000533244 FAM186BQ8IYM0 893 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 THEM5Q8N1Q8 247 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 XYLT2Q9H1B5 865 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 PIDD1Q9HB75 910 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 CYP4F11Q9HBI6 524 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 LMBRD1Q9NUN5 540 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 INSL5Q9Y5Q6 135 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 MTMR11A4FU01 709 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 PRRG1O14668 218 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 GABRDO14764 452 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 CCL16O15467 120 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 XYLBO75191 536 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 LRRC63Q05C16 580 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 ZACNQ401N2 412 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 ANKRD40Q6AI12 368 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 ISM2Q6H9L7 571 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 RNF135Q8IUD6 432 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 CRISPLD1Q9H336 500 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 VRTNQ9H8Y1 702 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 DOCK6Q96HP0 2047 aa21.97■■□□□ 1.11
CCS-208ENST00000533244 VNN1O95497 513 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 CCNE1P24864 410 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 ATICP31939 592 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 VAMP7P51809 220 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 STIM1Q13586 685 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 FOXR2Q6PJQ5 311 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 OSTM1Q86WC4 334 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 ZDHHC14Q8IZN3 488 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 TRIML1Q8N9V2 468 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 TDRD5Q8NAT2 981 aaKnown RBP21.96■■□□□ 1.11
CCS-208ENST00000533244 KBTBD7Q8WVZ9 684 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 DHTKD1Q96HY7 919 aaPredicted RBP21.96■■□□□ 1.11
CCS-208ENST00000533244 PGLYRP2Q96PD5 576 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 TSG101Q99816 390 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 KIAA1468Q9P260 1216 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 HSFX1Q9UBD0 423 aa21.96■■□□□ 1.11
CCS-208ENST00000533244 NOTCH4Q99466 2003 aa21.95■■□□□ 1.11
CCS-208ENST00000533244 TRIM49BA6NDI0 452 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 PPP1R3GB7ZBB8 358 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 PSMA7O14818 248 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 CETN3O15182 167 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 N4BP1O75113 896 aaKnown RBP21.95■■□□□ 1.1
CCS-208ENST00000533244 SP100P23497 879 aaPredicted RBP21.95■■□□□ 1.1
CCS-208ENST00000533244 MYL6P60660 151 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 SV2AQ7L0J3 742 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 OTOP3Q7RTS5 596 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 GRASPQ7Z6J2 395 aaPredicted RBP21.95■■□□□ 1.1
CCS-208ENST00000533244 LRRTM3Q86VH5 581 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 ADGRF2Q8IZF7 708 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 GBP4Q96PP9 640 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 PKMYT1Q99640 499 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 ACBD6Q9BR61 282 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 CLSTN2Q9H4D0 955 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 DDX43Q9NXZ2 648 aaKnown RBP21.95■■□□□ 1.1
CCS-208ENST00000533244 YIPF1Q9Y548 306 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 DOCK8Q8NF50 2099 aa21.95■■□□□ 1.1
CCS-208ENST00000533244 BIN1O00499 593 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 LRG1P02750 347 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 FAM163BP0C2L3 166 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 LHX1P48742 406 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 FKBP3Q00688 224 aaKnown RBP21.94■■□□□ 1.1
CCS-208ENST00000533244 SMARCB1Q12824 385 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 BIRC3Q13489 604 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 TRPC3Q13507 836 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 NCOA4Q13772 614 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 CAMK4Q16566 473 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 SLC39A12Q504Y0 691 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 PLCD3Q8N3E9 789 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 SYAP1Q96A49 352 aaPredicted RBP21.94■■□□□ 1.1
CCS-208ENST00000533244 EEF2KMTQ96G04 330 aa21.94■■□□□ 1.1
CCS-208ENST00000533244 AVENQ9NQS1 362 aaPredicted RBP21.94■■□□□ 1.1
CCS-208ENST00000533244 DNMT3BQ9UBC3 853 aaKnown RBP21.94■■□□□ 1.1
CCS-208ENST00000533244 PI4K2BG5E9Z4 385 aa21.93■■□□□ 1.1
CCS-208ENST00000533244 SLC16A3O15427 465 aaKnown RBP21.93■■□□□ 1.1
CCS-208ENST00000533244 PHACTR2O75167 634 aa21.93■■□□□ 1.1
CCS-208ENST00000533244 KRT13P13646 458 aa21.93■■□□□ 1.1
CCS-208ENST00000533244 WARSP23381 471 aaKnown RBP21.93■■□□□ 1.1
CCS-208ENST00000533244 NTHL1P78549 312 aa21.93■■□□□ 1.1
CCS-208ENST00000533244 MYL7Q01449 175 aa21.93■■□□□ 1.1
CCS-208ENST00000533244 DUSP4Q13115 394 aa21.93■■□□□ 1.1
CCS-208ENST00000533244 ATAD1Q8NBU5 361 aa21.93■■□□□ 1.1
CCS-208ENST00000533244 C2orf15Q8WU43 125 aaKnown RBP21.93■■□□□ 1.1
CCS-208ENST00000533244 ACSF2Q96CM8 615 aaPredicted RBP21.93■■□□□ 1.1
CCS-208ENST00000533244 HCFC1R1Q9NWW0 138 aa21.93■■□□□ 1.1
CCS-208ENST00000533244 TACC1O75410 805 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 TRIM49P0CI25 452 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 TRIM49CP0CI26 452 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 PPP3CAQ08209 521 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 TWF1Q12792 350 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 WDR72Q3MJ13 1102 aa21.92■■□□□ 1.1
CCS-208ENST00000533244 INTS6LQ5JSJ4 861 aaKnown RBP21.92■■□□□ 1.1
CCS-208ENST00000533244 TTI2Q6NXR4 508 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms